Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0168 ATGCGGAAGGGCAGAGGAGGAGGAGCCTCGGCGGCGGCGGCGGCGGCGGCGGTGAACGGATCCGTTTTAAAGGAGCCTCGGTACCGGGGCGTGCGGAAGAGACCGTGGGGGAGATTCGCGGCGGAGATCAGAGACCCGTTGAAGAAAGCCAGGGTTTGGTTGGGAACCTTCGATTCTGCCGAGGATGCTGCACGTGCCTACGACACCGCCGCTCGGAATCTCCGAGGTTCCAAGGCCAAAACCAATTTCCCTCTCTCACCTTTTTGCTATCAACACCCCACCACGGATCCTTTCTTCTACGCTGGTTTCCACGACCACCAAAACAACAGCAACAACAACAACGACAACCTTAACAACCCTCAAAGACCAACTTCAAGTGGCATGAGTAGCACCGTTGAGTCCTTCAGTGGGCCCCGCCCTCCCACCACAACCACAACCACCACGACGCCGTTTTTGACCACTACGCGGAGATACCCGCGCACTCCCCCTCTTGTCCCCGAAGACTGCCACAGTGACTGCGACTCTTCCTCCTCCGTCGTTGACGACAGCGACGACAACATCGTTTCCTCGTCGTTTCGACCTCCCTTGCCGTTCGATCTCAACGCGCTGCCGTTTGATGATGATGCTGCCGTCGTGGATGATGATCTACGCTGCACCGCGCTTTGTCTCTGA 672 0.5818 MRKGRGGGASAAAAAAAVNGSVLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEDAARAYDTAARNLRGSKAKTNFPLSPFCYQHPTTDPFFYAGFHDHQNNSNNNNDNLNNPQRPTSSGMSSTVESFSGPRPPTTTTTTTTPFLTTTRRYPRTPPLVPEDCHSDCDSSSSVVDDSDDNIVSSSFRPPLPFDLNALPFDDDAAVVDDDLRCTALCL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0168 223 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 205 - -
Gso14g0168 223 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Gso14g0168 223 MobiDBLite consensus disorder prediction 100 186 - -
Gso14g0168 223 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Gso14g0168 223 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Gso14g0168 223 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Gso14g0168 223 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Gso14g0168 223 PANTHER ETHYLENE RESPONSE FACTOR 4 205 - -
Gso14g0168 223 CDD AP2 26 86 IPR001471 GO:0003700|GO:0006355
Gso14g0168 223 MobiDBLite consensus disorder prediction 104 156 - -
Gso14g0168 223 SUPERFAMILY DNA-binding domain 27 86 IPR016177 GO:0003677
Gso14g0168 223 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0168 Gso-Chr14 1482932 1484428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0168 1 223 AP2-EREBP Transcription Factor Family AT1G50640 60.000 3.85e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso14g0168 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0168 K09286 - gmx:100820249 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0168 14 1482932 1484428 Gso2g2497 2 49404707 49406157 GST
Gso18g0752 18 9100391 9101678 Gso14g0168 14 1482932 1484428 PCT
Gso8g2654 8 44201279 44202616 Gso14g0168 14 1482932 1484428 PCT
Gso14g0168 14 1482932 1484428 Gso18g0752 18 9100391 9101678 PCT
Gso14g0168 14 1482932 1484428 Gso8g2654 8 44201279 44202616 PCT