Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0151 ATGGCATCTTCTTCAGACTCATGGGTGAAGGAATATAATGAAGCACTGAAACTTGCTGATGATATCAGTGGCATGATTTCTGAGCAGAGTTCATTTCCTGCATCTGGACCAGAAACCCAGCATCATTCATCTGCTATAAGGAGAAAGATTACAATATTGGGGACCAGGCTTGATAGCTTGCAGTCCCTTTTGTCAAAGCTTCCCGGCAAGCAGCCCATATCTGAGAAGGAGATGAATCGGCGCAAGGACATGCTTTCAAATTTGAGATCAAAAGTTAATCAGATGGCTTCCACGTTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGAAAGAAAACCAGATGCAATGACCAGAATGGTTGGCCTGGACAACAATGGACTTGTTGGACTTCAGCGGCAAATTATGAAAGAACAAGACGATGGCCTTGAGCAATTGGAAGAGACCGTGGCAAGCACCAAACATATTGCATTGGCAGTTAATGAAGAGCTGGATCTACACACTAGACTAATTGATGACTTAGACCAACATGTAGATGTCACAGATTCTCGGCTTAGGCGGGTGCAGAAGAACTTAGCGGTTTTAAATAAGCGAACCAAGGGTGGTTGCTCCTGCATGTGCATGCTATTATCAGTGGTTGGTATAGTGGCTTTGATTGTTGTTATTTGGCTATTGGTCAAATATTTGTAA 699 0.4306 MASSSDSWVKEYNEALKLADDISGMISEQSSFPASGPETQHHSSAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLSNLRSKVNQMASTLNMSNFANRDSLLGPERKPDAMTRMVGLDNNGLVGLQRQIMKEQDDGLEQLEETVASTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCMCMLLSVVGIVALIVVIWLLVKYL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0151 232 Gene3D - 138 200 - -
Gso14g0151 232 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 198 IPR000727 -
Gso14g0151 232 SUPERFAMILY SNARE fusion complex 127 197 - -
Gso14g0151 232 SMART tSNARE_6 131 198 IPR000727 -
Gso14g0151 232 Pfam SNARE domain 173 224 IPR000727 -
Gso14g0151 232 PANTHER SYNTAXIN 1 227 IPR045242 -
Gso14g0151 232 SUPERFAMILY t-snare proteins 21 100 IPR010989 GO:0016020|GO:0016192
Gso14g0151 232 CDD SNARE_Qc 139 196 - -
Gso14g0151 232 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0151 Gso-Chr14 1312690 1315147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0151 1 232 SNARE and Associated Proteins AT1G16240 73.820 7.68e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0151 K08503 - gmx:100782666 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0737 18 8782237 8786900 Gso14g0151 14 1312690 1315147 PCT
Gso8g2668 8 44361169 44365680 Gso14g0151 14 1312690 1315147 PCT
Gso14g0151 14 1312690 1315147 Gso18g0737 18 8782237 8786900 PCT
Gso14g0151 14 1312690 1315147 Gso8g2668 8 44361169 44365680 PCT