Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0145 ATGCCGGACCAAGATATTTTCAGTTGCATTAGTGAACCTCGTCTTGTAGCCAGAAAGTTCTTGGCCAGACCTCAGCATGAGGGTGTTGGAGCCGTTGTTAGAAGAAGCATAGGGAGATTTGAACTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTGACTGCTCCTGCTGGGTTTCCTGACCATCCACATAGAGGATTTGAGACGGTCACATACATGTTGCAGGGAGCTGTAACGCACGAAGATTTTGAAGGACATAAGGGAACAATTGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGTTAGTTCACTCAGAAATGCCTGCAGCTCAAGGAACCCATAAGGGTCTTCAGCTGTGGATCAATCTTGCTTCAAAACATAAAATGATTGAGCCAAGGTACCAAGAAATGTTGAGCAAGGACATAGCTGAAACTATGATAGATGGTATCAAAGTTAGAGTTATAGCAGGGGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGATTTTACTCTTAAACCTGGTGCTCACTTGCAACAACTTATACCAAAGTCTTGGAATGCCTTCGTCTACATATTGGAAGGAGAGGGTGTATTTGGAAACCAAAAGTCTCAACCTGTAACCTCTCACCATATACTTCTTCTTGGTCCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAGGTCCTTAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCTTTTGTGATGAATACTCAGGAAGAGATTGACCAAACAATTGATGATTTTGAGAACTATACCAACGGATTTGAGAAAGCTAGACATTGGAGGTCTGAAAGTGCAATTAGCCTTGATTATTGA 906 0.4316 MPDQDIFSCISEPRLVARKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGLVHSEMPAAQGTHKGLQLWINLASKHKMIEPRYQEMLSKDIAETMIDGIKVRVIAGEALGIKSPIYTRTPTMYLDFTLKPGAHLQQLIPKSWNAFVYILEGEGVFGNQKSQPVTSHHILLLGPGDGLEAWNKSSKVLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWRSESAISLDY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0145 301 CDD cupin_pirin_N 31 128 - -
Gso14g0145 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Gso14g0145 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Gso14g0145 301 PANTHER OS09G0484800 PROTEIN 8 298 - -
Gso14g0145 301 PIRSF Pirin 12 292 IPR012093 -
Gso14g0145 301 Pfam Pirin 33 126 IPR003829 -
Gso14g0145 301 CDD cupin_pirin_C 176 252 - -
Gso14g0145 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Gso14g0145 301 PANTHER PIRIN-RELATED 8 298 IPR012093 -
Gso14g0145 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0145 Gso-Chr14 1269400 1272675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0145 11 289 Calmodulin-binding Proteins AT3G59220 59.431 6.86e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0145 K06911 - gmx:100790637 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0145 14 1269400 1272675 Gso2g2518 2 49581512 49584738 GST
Gso18g0716 18 8277180 8283187 Gso14g0145 14 1269400 1272675 PCT
Gso8g2684 8 44506655 44510247 Gso14g0145 14 1269400 1272675 PCT
Gso14g0145 14 1269400 1272675 Gso18g0716 18 8277180 8283187 PCT
Gso14g0145 14 1269400 1272675 Gso8g2684 8 44506655 44510247 PCT