Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0138 ATGGACGGCACCACCAACTCCGGCGAACCCCGCTCCAGTTCGGTGCTCCAAAATACTGGGGCATCCGAGGATCCGAATCGAAGCGGGTCGGGTCAGAATTCGATGGCGAGGTACAAGCTGATGTCACCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATCACGATTCCTCCGGGGCTCAGTCCGACGTCGTTTCTGGAATCCCCGGTTCTTCTTTCCAACATGAAGGTGGAGGCTTCACCAACTACAGGGTCCCTCCGTAAGCTCCAACAAACAATGCATGGTTCTATGGCCTCTGCTGCATTTCCAGTAACCACTGCCTGCTTCGATACCAATACTGTTGATGACAGAAAATCAAGTTTCTTTGAGTTCAAACCACTCAGCAGATCTAATATGGTTCCTGCAGACTTCAACAACCATGTAAGTAAACAATCTACTCAAGTAGAAGGTCCAGGAAAAACTCAATCATTTGCTTCCTCACCATTAGTGGAAAGTGAGATAGCAGTTCCTTCTAATGAATTAAGCCTATCATCACCTGTACAAAAGGTTAGTTCTAGTGCTAGTGCTCCTGTTGATGTTGACTTGGATGACATTAACCACAAAGGCAACACAGCTACTGGGCTTCAAGCATCACATGTTGAGGTTAGAGGCAGTGGACTTTCAGTTGCAGCTGAGAAAACATCTGATGATGGATACAATTGGCGAAAATACGGGCAAAAGCTTGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGTACACATCCCAACTGTGAAGTGAAAAAACTTTTTGAGCGCTCTCATGATGGTCAAATCACTGAGATAGTTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAGCTGCCGATACTCTACCGGTACTGTTTTGTCTATTCAAGGAGAGAGATCTGATAAGGCTTCTATGGCTGGCCGAGATGACAAAGCAACTGCTATGTATGGTCAGGTGTCTCATGCTGCTGAGCCCAACAGTACTCCAGAGTCATCACCTGTTGCAACAAATGATGATGGTTTAGAGGGTGTTGCCGGGTTTGTGTCAAATAGGACTAATGAAGAGGTTGATAATGACGATCCCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGTTGACATCACTCCAGTAGTTAAGCCTATCCGGGAACCACGGGTTGTCGTACAAACTTTGAGTGAGGTTGACATATTGGATGATGGGTACCGCTGGCGTAAGTATGGCCAAAAGGTTGTGAGAGGCAATCCTAACCCAAGGAGCTATTACAAATGCACAAATGCTGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAATCATGATGTACCAGCTGCAAGGAATAGCAGCCATGACATGGCAGTACCAGCAGCTGCAGCAGGTGGACAGACAAGAACTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGAATGGGAATTAGCTCAGCTGCTGAACATAGGTCAAATGGGCAAGGGAAAATGCTGCATTCAGAGTTTGGGGACACACAAACTCATACTAGCAGTTCCAACTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTACATAACAGCTCAAATCCCTTTGGTTCTAGAGACAATAGGAGTGATGGTCCATCTTTAAACCGTTCCTCATATCCATGCCCACAGAGCATGGGAAGAATACTAATGGGTCCATGA 1758 0.4568 MDGTTNSGEPRSSSVLQNTGASEDPNRSGSGQNSMARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEASPTTGSLRKLQQTMHGSMASAAFPVTTACFDTNTVDDRKSSFFEFKPLSRSNMVPADFNNHVSKQSTQVEGPGKTQSFASSPLVESEIAVPSNELSLSSPVQKVSSSASAPVDVDLDDINHKGNTATGLQASHVEVRGSGLSVAAEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSCRYSTGTVLSIQGERSDKASMAGRDDKATAMYGQVSHAAEPNSTPESSPVATNDDGLEGVAGFVSNRTNEEVDNDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVPAAAAGGQTRTKLEESDTISLDLGMGISSAAEHRSNGQGKMLHSEFGDTQTHTSSSNFKFVHTTSAPVYFGVLHNSSNPFGSRDNRSDGPSLNRSSYPCPQSMGRILMGP* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0138 585 ProSiteProfiles WRKY domain profile. 223 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 Gene3D WRKY domain 389 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 Gene3D WRKY domain 220 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 ProSiteProfiles WRKY domain profile. 399 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 27 565 - -
Gso14g0138 585 MobiDBLite consensus disorder prediction 1 37 - -
Gso14g0138 585 SUPERFAMILY WRKY DNA-binding domain 225 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 Pfam WRKY DNA -binding domain 405 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 Pfam WRKY DNA -binding domain 229 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 565 IPR044810 GO:0003700
Gso14g0138 585 MobiDBLite consensus disorder prediction 555 585 - -
Gso14g0138 585 SUPERFAMILY WRKY DNA-binding domain 396 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 SMART WRKY_cls 404 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 SMART WRKY_cls 228 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0138 585 MobiDBLite consensus disorder prediction 555 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0138 Gso-Chr14 1204617 1210161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0138 41 585 WRKY Transcription Factor Family AT4G26640 54.792 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g0138 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0138 - - gmx:547723 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0138 14 1204617 1210161 Gso2g2527 2 49651039 49656880 GST
Gso18g0687 18 7801758 7807775 Gso14g0138 14 1204617 1210161 PCT
Gso8g2695 8 44611966 44617910 Gso14g0138 14 1204617 1210161 PCT
Gso14g0138 14 1204617 1210161 Gso18g0687 18 7801758 7807775 PCT
Gso14g0138 14 1204617 1210161 Gso8g2695 8 44611966 44617910 PCT