Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0131 ATGTTTATGTTGTCTCTTTTCTCACCACTTTCCACTGCTGTTCTCCTCAAACCCATTTTCCTTCATGGCTTCTCCGCCTTCATCCACCTTCTGTTGCTGCTTGCGGTTTCGCTGTCATGGGTTTGGAACAAAATCACAGCAGGTGCCAGGGATGAGTCCAAGGAGAAGCCAAGCCACACCCTCTTCAAAACGACGGTGTTTTCTTCTCTTGGTGTTTCTGCTTTCAATTTTCTCCTCTGTTTGTTTACCTACTTCTACTGGTATACAAGTGGCTGGTCAGAAGAAAAGCTTGTGACCCTTTTGGATTTGGCGCTAAAAACACTTGCTTGGGGCGTTGTTTGCGTTTGCTTGCAAAATGGGTTCTTCAGTTCCGGTGAAAGAAGGTTCTCGTTCTTCTTCAGAGCCTGGTGCACTTTCTACCTTGTTGTTTCTTGCTATTGCTTCGTGGTGGACATTGTTGTTGTATCGGAGAGACGTGTTGCTCTGCCAACTCGGTACTTAGTCTCTGATGTGGTCTCCACTTGTGTTGGTTTGTTCTTCTGTTACGTGGGGTATTTTGTGAAAAACGAGGTTCATGTTGATAACGGTATTCAGGAACCTCTTTTGAATAGCGATGCCTTGGAGTCAAAGGAGAGCAAGGGCGGGGACACTGTGACCCCTTTCTCATATGCTGGGTTTTTGAGCATTCTTACCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGTAATAAGAAGACCCTGGACCTTGAGGATGTTCCTCAACTAGACGGCAGAGATAGTGTAATTGGTGCTTTTCCAAGTTTCAGAGAGAAACTTGAGGCTGATTGTGGGGGAATTAACAGAGTCACCACACTGAAGTTGGCGAAGTCGTTAATAATGTCAGCATGGAAGGAGATTCTTATCACAGCTTTTCTTGCATTGTTAAACACTTTGGCTTCTTATGTTGGTCCATATCTTATTGACGGTTTTGTTCAGTACCTGGATGGACAACGGCTATATGAAAACCAGGGCTATTTTTTGGTTTCTGCATTTTTCTTTGCAAAGCTTGTAGAGTGCCTGACCCAAAGGCATTGGATCTTTAAGTTGCAGCAAGTTGGACTCCGAATCCGAGCACTGCTTGTCACGATGATCTATAACAAGGCTCTTACCCTTTCTTGCCAATCAAAGCAGGGCCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCGGAAAGAGTAGGTGTCTTCAGTTGGTATATGCATGATTTGTGGATGGTGGCTCTGCAAGTTACGTTAGCCTTGTTGATTTTGTATAAAAACCTCGGTCTGGCTTCAATTGCTGCTTTAGTTGCAACTGTTGTTATTATGTTAGCAAATGTTCCCTTGGGATCGTTGCAAGAGAAGTTTCAAAAGAAGTTGATGGAGTCAAAAGATACAAGAATGAAGGCCACATCTGAGATTCTAAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATCAAGTTTCTATCAAAAATAACCGAGCTCAGGAAAAATGAGCAAGGTTGGCTAAAAAAATATGTTTATACTGCAGCGGTGACCACGTTTGTGTTTTGGGGTTCCCCTACATTTGTATCTGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCCCTTGAATCAGGGAAGATCTTGTCTGCACTTGCAACGTTCCGGATTCTTCAAGAGCCCATTTACCGTCTTCCAGATACAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGTGTCATTCCTTCGTCTTGATGACTTACGGTCTGATGTTGTAGAGAAGCTTCCTTGGGGCAGTTCTGATACAGCAATTGAAGTAGTTGATGGAAACTTCTCTTGGGATTTATCCTCCCCTAATCCAACATTGCAAAATATAAATCTTAAAGTTTTTCATGGGATGAGGGTTGCTGTTTGTGGTACAGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAAGGTTTGCGGAACAAAGGCCTATGTTGCTCAATCTCCATGGATACAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTGAACGCATGGATAGGGAAAGGTATGAGAAGGTACTTGAAGCCTGTTCCTTGAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACAATTATAGGAGAACGTGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCACGTGCACTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCGGTGGATGCTCACACAGGATCTCACCTCTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAAGATGGGAAAATTACTCAATGTGGAAAGTATACTGATCTGCTTAATAGTGGTGCTGATTTTATGGAACTTGTTGGTGCACACAAAAAGGCTTTGTCTACACTAGATTCCTTGGATGGAGCAACGGTATCTAATGAAATAAACGCCTTGGAACAAGATGTAAATGTCTCTGGCACGTATGGTTTTAAAGAAAAAGAGGCTAGAAAGGATGAGCAAAATGGTAAAACAGACAAGAAAAGCGAACCACAAGGCCAGCTTGTTCAGGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTTTATTGGAAATGTATCACAACAGCATATGGAGGAGCTCTTGTACCATTCATATTATTGGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGTAATTATTGGATGGCCTGGGCGACTCCCATCTCATCAGATGTGGAGCCACCTGTTGAAGGAACGACTCTTATAGCAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGCAATGCTTCTTGTCACAGCTGGTTATAAAACAGCTACTATACTCTTTAATAAAATGCACTTCTGCATTTTCCGTGCCCCAATGTCATTTTTCGATTCCACTCCAAGTGGACGAATCCTTAACAGGGCTTCAACTGATCAAAGTGCATTGGATACAGACATTCCTTATCAAATTGCATCATTTGCGTTCATCATGATCCAGCTTTTGGGAATTATTGCAGTGATGTCTCAGGCTGCATGGCAGGTTTTTGTTGTCTTTATACCTGTGATAGCAGTCAGCATCTGGTATCAGCAATATTATATTCCATCAGCCCGAGAACTAGCACGTTTAGTTGGAGTCTGCAAAGCCCCAATCATTCAACACTTTTCTGAAACAATTTCTGGTACTTCAACTATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGATATTCTCGGCCAAAGTTCAATATTGCCGGTGCCATGGAATGGTTGTGCTTCCGCTTGGATATGCTGTCTTCTATCACATTTGCCTTTTCCTTAGTATTCTTAATATCTATTCCACAGGGATTCATAGATCCAGGCCTTGCTGGTTTAGCTGTTACATATGGACTTAATTTGAACATGATACAAGCTTGGATGATATGGAATCTCTGCAATATGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTGTATTTCTAGTGAGCCTCCCCTTGTTGTGGACGAAAATCGGCCAGATCCTTCCTGGCCGTCATATGGCGAAGTTGGTATACAAGATTTGCAGGTTCGTTATGCTCCACATCTCCCACTTGTGTTGCGTGGTCTTACATGCAAATTTCGTGGAGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATACAAACACTTTTCCGAATTGTTCAGCCTACTTCCGGCCAAATTATGATTGACAGCATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACTGTGAGAAATAATCTGGACCCCCTGGAAGAATACAGTGATGAACAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTCGACTCCAAAGTTGATGCTGTAGTTACCGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGCAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAGGCAACAATTCTCTGGCTCTACAGTAATTACTATTGCACATCGAATAACTTCTGTTCTACACAGTGATATGGTTCTGCTTCTCAGTCAAGGACTCATTGAGGAGTATGACACCCCAACAAGGTTGATAGAGAATAAGTCATCATCTTTTGCTCAACTTGTTGCTGAGTATACCATGAGGTCCAACTCCAGTTTTGAGAAATCTGATGATCATTGA 4497 0.4178 MFMLSLFSPLSTAVLLKPIFLHGFSAFIHLLLLLAVSLSWVWNKITAGARDESKEKPSHTLFKTTVFSSLGVSAFNFLLCLFTYFYWYTSGWSEEKLVTLLDLALKTLAWGVVCVCLQNGFFSSGERRFSFFFRAWCTFYLVVSCYCFVVDIVVVSERRVALPTRYLVSDVVSTCVGLFFCYVGYFVKNEVHVDNGIQEPLLNSDALESKESKGGDTVTPFSYAGFLSILTFSWVGPLIAVGNKKTLDLEDVPQLDGRDSVIGAFPSFREKLEADCGGINRVTTLKLAKSLIMSAWKEILITAFLALLNTLASYVGPYLIDGFVQYLDGQRLYENQGYFLVSAFFFAKLVECLTQRHWIFKLQQVGLRIRALLVTMIYNKALTLSCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVTLALLILYKNLGLASIAALVATVVIMLANVPLGSLQEKFQKKLMESKDTRMKATSEILRNMRILKLQGWEIKFLSKITELRKNEQGWLKKYVYTAAVTTFVFWGSPTFVSVVTFGTCMLIGIPLESGKILSALATFRILQEPIYRLPDTISMIAQTKVSLDRIVSFLRLDDLRSDVVEKLPWGSSDTAIEVVDGNFSWDLSSPNPTLQNINLKVFHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGERMDRERYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYTDLLNSGADFMELVGAHKKALSTLDSLDGATVSNEINALEQDVNVSGTYGFKEKEARKDEQNGKTDKKSEPQGQLVQEEEREKGKVGFSVYWKCITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPISSDVEPPVEGTTLIAVYVGLAIGSSFCILARAMLLVTAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSALDTDIPYQIASFAFIMIQLLGIIAVMSQAAWQVFVVFIPVIAVSIWYQQYYIPSARELARLVGVCKAPIIQHFSETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFSLVFLISIPQGFIDPGLAGLAVTYGLNLNMIQAWMIWNLCNMENKIISVERILQYTCISSEPPLVVDENRPDPSWPSYGEVGIQDLQVRYAPHLPLVLRGLTCKFRGGLKTGIVGRTGSGKSTLIQTLFRIVQPTSGQIMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYSDEQIWEALDKCQLGDEVRKKEGKLDSKVDAVVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQQFSGSTVITIAHRITSVLHSDMVLLLSQGLIEEYDTPTRLIENKSSSFAQLVAEYTMRSNSSFEKSDDH* 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0131 1498 CDD ABCC_MRP_domain1 614 814 - -
Gso14g0131 1498 CDD ABC_6TM_ABCC_D1 301 588 IPR044746 GO:0140359
Gso14g0131 1498 CDD ABC_6TM_ABCC_D2 925 1219 IPR044726 GO:0140359
Gso14g0131 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 836 IPR027417 -
Gso14g0131 1498 Pfam ABC transporter transmembrane region 300 567 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso14g0131 1498 Pfam ABC transporter transmembrane region 927 1169 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso14g0131 1498 SUPERFAMILY ABC transporter transmembrane region 290 593 IPR036640 GO:0005524|GO:0016021
Gso14g0131 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 927 1207 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso14g0131 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 300 580 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso14g0131 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1236 1479 IPR027417 -
Gso14g0131 1498 MobiDBLite consensus disorder prediction 875 901 - -
Gso14g0131 1498 ProSitePatterns ABC transporters family signature. 739 753 IPR017871 GO:0005524
Gso14g0131 1498 CDD ABCC_MRP_domain2 1242 1466 - -
Gso14g0131 1498 Gene3D - 1227 1484 IPR027417 -
Gso14g0131 1498 Pfam ABC transporter 632 766 IPR003439 GO:0005524
Gso14g0131 1498 Pfam ABC transporter 1262 1413 IPR003439 GO:0005524
Gso14g0131 1498 Gene3D ABC transporter type 1, transmembrane domain 886 1224 IPR036640 GO:0005524|GO:0016021
Gso14g0131 1498 Gene3D ABC transporter type 1, transmembrane domain 280 596 IPR036640 GO:0005524|GO:0016021
Gso14g0131 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 614 837 IPR003439 GO:0005524
Gso14g0131 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 85 1494 - -
Gso14g0131 1498 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 85 1494 - -
Gso14g0131 1498 Gene3D - 601 852 IPR027417 -
Gso14g0131 1498 SUPERFAMILY ABC transporter transmembrane region 926 1226 IPR036640 GO:0005524|GO:0016021
Gso14g0131 1498 SMART AAA_5 641 814 IPR003593 -
Gso14g0131 1498 SMART AAA_5 1270 1459 IPR003593 -
Gso14g0131 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1482 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0131 Gso-Chr14 1150436 1156773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0131 614 844 Calmodulin-binding Proteins AT2G36910 29.482 1.32e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0131 - K05666 gmx:100777836 2907.09