Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0126 ATGATGATGATGATGATGGGGTTGGTGTCTTCCAGAGTTGTGTTCTTGTTTGTTGTTTCGATTTTCGTGATTTGGGCTCAGGTGGTGGATTTAGCAGAAGGTGGTGCTGTTCGAAATTACATTAGTTGGGAAGATTTGCAGGTGAATGAACAAAGGTTGGCCGTGAAGTCGTCCCATAACCAGGTTCGAGTTATAACTGTTAACCAGAATGGTGGGGGACATTCCAAAACTGTTCAAGGTGCTGTGAATATGGTTCCTGATAATAACAGACAAAGGGTCAAAATTTTCATTTTTCCAGGAATTTACAGAGAAAAAGTGCGTGTGCCTGTGACCAAGCCTTATGTATCATTTATAGGGAAAAGAAATCGAACAGCAAGTCCTATAATTACTTGGAACAGTAAATCATCTGACAAAGGCCCAAATGGCACAGCATTGGGCACCTATGCTTCAGCAACAGTGGGAGTGGACTCAGATTATTTCTGTGCAACTGGGATCACTTTTGAGAACTCAGTGATTGCATCGGCTGGTGGAAAAGGGATGCAAGGAGTGGCACTGAGGGTAAGCAGTCCAAAAGCAATGTTCTATCGAGTGAGGATTAAGGGAACACAGGACACTCTCTTGGACAGCACAGGAAATCATTACTTCTTAAAGTGTCGCATCATAGGAAAAGTTGATTTTATCTGTGGCAGCGCAAAATCACTCTATGAGAAGTGTCGTCTTCAGTCAATAGCTGAGAACTATGGAGCAATAGCAGCACATCATAGGGATTCACCAACAGACGACACAGGTTTTTCTTTTGTAAGTTGCAGTATTAGAGGATCTGGCAGTGTGTACCTTGGCAGAGCATGGGGGAACTACTCAAGAATTATATACTCCAAATGTAATATGGATGGCATTATTAATCCTCAAGGGTGGTCAGACTGGAATCATTCACATAGGAAGAAGACTGCAGTGTTTGCTGAGTATCAATGCAAGGGAAGAGGAGCAGATAGAAGACATAGGGTGCCTTGGTCAAAATCATTCAGCTATCCGGAAGCAAGTCCTTTCCTTTACAAGAGCTTCATAGATGGAGACCAGTGGCTCAGACTGTAG 1092 0.4304 MMMMMMGLVSSRVVFLFVVSIFVIWAQVVDLAEGGAVRNYISWEDLQVNEQRLAVKSSHNQVRVITVNQNGGGHSKTVQGAVNMVPDNNRQRVKIFIFPGIYREKVRVPVTKPYVSFIGKRNRTASPIITWNSKSSDKGPNGTALGTYASATVGVDSDYFCATGITFENSVIASAGGKGMQGVALRVSSPKAMFYRVRIKGTQDTLLDSTGNHYFLKCRIIGKVDFICGSAKSLYEKCRLQSIAENYGAIAAHHRDSPTDDTGFSFVSCSIRGSGSVYLGRAWGNYSRIIYSKCNMDGIINPQGWSDWNHSHRKKTAVFAEYQCKGRGADRRHRVPWSKSFSYPEASPFLYKSFIDGDQWLRL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0126 363 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 19 363 - -
Gso14g0126 363 Pfam Pectinesterase 65 358 IPR000070 GO:0030599|GO:0042545
Gso14g0126 363 Gene3D - 59 363 IPR012334 -
Gso14g0126 363 PANTHER PECTINESTERASE QRT1 19 363 - -
Gso14g0126 363 SUPERFAMILY Pectin lyase-like 64 361 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0126 Gso-Chr14 1097345 1100691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0126 3 315 Carbohydrate Esterase AT5G55590 52.410 2.41e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0126 K01051 - gmx:100804220 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0126 14 1097345 1100691 Gso2g2541 2 49771950 49775195 GST