Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0123 ATGATTAATTATGGAGAAGCTAGATCATATGGGATCACTTGCATTGAATCACAAGCTTTCAGAAGCCTTTGCCATACTCATATCTCATCTCCTTCAGCAACAACAACAAACCACTTCAAAGGCACACAATTGAGGAGATCCATATGGCTCGTATCAGTTGTAGGTGATGATCCAAACGATTTCATTTTGCATTTGTGGTGGTCCTATATTGCAGATCCTTGTTTTCTAAATTCCTCTGCTGTGGGTAAAGGAGCCTATATGGCCAACAATGGTGTAAAGGAGCCCTTGCTGTGGGTATCACTTGATGCGACTCAAAAGACTGAACAGCAGCTAAACAAGAGAAGCCTCCTCCGTTTTAGAAGTGCTCCTCACGCAGAAATTGTTCCTACTGAGACAAATGGCAATGAATCAATTCCCCATAGTGCGTCCATATTCCAGAATTTACATCCAAGCTTTAAAAGAGTGGCTATCTACCTTGCAGTCTATTTAGGTGTTGGTGCTTTAATCTTCTACCTTGTCCGGAACCAGATTAAGGGGCAGAAAACAGATGGAATTCTTGATGCTTTGTACTTTACAATTGTGACAATGACAACTGTTGGATATGGAGACCTTGTGCCAAATAGCCACCTTACAAAACTACTTGCATGTGCTTTTGTTTTCTCTGGGATGGCATTGATTGGACTAATTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAACAGGAAATTTTGCTAGTTAAAGCCATGCGCATGCACCAAAAAGTTGGTTCAACTGAAATTTTAAGGGAGGTTGAGACCAATAAAACAAGATACAAATTATTTATAGTCTTTTTCCTTCTTTTTATTCTCATCATCGCCGGGACAATTTTTTTGGTCACAGTTGAGAAATTGGATGTTATTGATGCATTCTACTGTGTTTGTTCTACAATTACAACCCTGGGTTATGGGGATCAAAGTTTCTCAACTCAAGCAGGAAGAATATTTGCTGTGTTTTGGATATTGACAGGTACTATTACTTTAGCTCAGCTTTTCCTCTACATTGCTGAGCTAAACACTGAAATCAGACAAAAGGAACTTGTCAAGTGGGTACTTACAAGGAAAGTGACCAATTCAGATTTGGAGGCTGCAGATCTTGATGTGGATGGGACTGTGAGGGCTGCGGAATTCGTTATTTATAAGCTCAAAGAGATGGGGAAGATTAGTCAAGAAGATATATCACTTGTGATGCAGGAGTTTGAACAGCTTGATGTTGATGATTCTGGCACACTATCAACTTCTGATATAACTCTTGCTCAGTCATCTTAG 1305 0.3977 MINYGEARSYGITCIESQAFRSLCHTHISSPSATTTNHFKGTQLRRSIWLVSVVGDDPNDFILHLWWSYIADPCFLNSSAVGKGAYMANNGVKEPLLWVSLDATQKTEQQLNKRSLLRFRSAPHAEIVPTETNGNESIPHSASIFQNLHPSFKRVAIYLAVYLGVGALIFYLVRNQIKGQKTDGILDALYFTIVTMTTVGYGDLVPNSHLTKLLACAFVFSGMALIGLIVSKAADYLVEKQEILLVKAMRMHQKVGSTEILREVETNKTRYKLFIVFFLLFILIIAGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAGRIFAVFWILTGTITLAQLFLYIAELNTEIRQKELVKWVLTRKVTNSDLEAADLDVDGTVRAAEFVIYKLKEMGKISQEDISLVMQEFEQLDVDDSGTLSTSDITLAQSS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0123 434 Gene3D - 253 364 - -
Gso14g0123 434 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Gso14g0123 434 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 107 429 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso14g0123 434 Pfam Ion channel 279 350 IPR013099 -
Gso14g0123 434 Pfam Ion channel 158 238 IPR013099 -
Gso14g0123 434 Gene3D - 149 243 - -
Gso14g0123 434 PRINTS Two pore domain K+ channel signature 194 222 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso14g0123 434 PRINTS Two pore domain K+ channel signature 311 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso14g0123 434 PANTHER TWO PORE POTASSIUM CHANNEL A 107 429 - -
Gso14g0123 434 SUPERFAMILY Voltage-gated potassium channels 245 400 - -
Gso14g0123 434 SUPERFAMILY Voltage-gated potassium channels 154 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0123 Gso-Chr14 1081513 1084616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0123 135 434 Ion Channels AT5G55630 65.894 1.19e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0123 K05389 - gmx:100800137 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0123 14 1081513 1084616 Gso2g2546 2 49800723 49803384 GST