Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0116 ATGGCCATGGATTTCACTTTCTTCTTCTTCTTCTTCATCTTGACGTTGTTATTGTGGGAGGTGGCAGTAGCAGACAACGTGAGCTTCGACTTCCCTTCTTTCACTCTCAACAACATCACCCTCCTCGGCGATTCCTCTCTCAGAAACAACGGCGTCGTAAGACTCACCAACGCCGCCCCCACCTCCAGCACCGGCGCCGTTGTCTACAGCCAACCTGTCTCCCTCTTCCACGCCTCCTTCTCCACCACCTTCTCCTTCTCCATCCACAACCTCAACCCCACCTCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCCAACACCACCCTCTCCCTCTCCGGCCCCCTTGGCCTCCCCACCGCCACCGGCTTCGTCGCCATCGAATTTGACACGCGCCTCGACGCGCGCTTTGATGACCCGAACGAGAACCACGTGGGCTTCGACGTGGACTCCATGAAGTCCCTCGTAACCGGAGACCCCATCTTGGACGGCATCGACCTCAAGAGCGGCAACACCATCGCTGCATGGATCGACTACAGCACCCAATACACATTACTGAACGTTTTCTTGAGCTATTCACGTTCTTCAAAACCCCTCCTACCTCTCCTCTCTGTCAAGTTCGATCTTTCTCATCACCTCAGAGACCCCGTCTACGTTGGCTTCTCCGCTTCCACTCAGGGAAGCATCGAGCTTCACCATATAAAAAATTGGACCTTTCACGCCAAAACAATAACCACCACGTTGCACCACCCTCATAACGTTTCCGTGGTGGGAATTTCACGTTCCGGTGCCACCAAGAAGCGTGACAAGAGGGTTGTTGGCATTGTTGCGGGTTCTGTTTCTTTCTTTGTGGCTTTCACAATATTCTTGGGGTATGTTTTTGTTCGGAGATGGAAGATTGGTGGGAGAAAAGAGAGAGAGAAAGACAAGTTCCAGAAGAGTGGTTTCGTGGCGTATCCTAGGGAGTTTCATTACAAAGAGTTGAAGTCTGCTACAAAAGAGTTTCACCCTAGTAGGATTGTTGGGCATGGATCTTTCGGAACAGTGTATAAGGCTTTCTTTATATCTTCTGGAACCATCGCTGCTGTGAAAAGGTCAAGACATTCTCACGAAGGGAAGACTGAGTTTCTGGCTGAACTCAACACCATTGCTGGTTTGAGGCACAAGAATTTGGTTCAGCTTCAAGGTTGGTGCGTTGAGAAGGGGGAGTTGCTGCTTGTGTATGACTTCATGCCCAATGGAAGCTTGGACAAGATGCTTTACAAGGAACCTGAAAGGGGGAAGCTTTTGAGTTGGTCTCACAGGCAAAACATTGCACTAGGGTTGGCTTCTGTGCTGGTTTACCTTCACCAAGAGTGTGAGCAGAGAGTGATTCACAGGGATATTAAGGCTGGGAACATATTGCTGGATGGAAATTTCAACCCTAGGTTAGGGGATTTTGGATTGGCAAAGCTTATGGATCATGATAAGAGCCCTGTTTCCACTTTAACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAGTATGGAAAAGCCACTGATAAGACTGATGTTTTCAGCTATGGGGTGGTTGTGCTTGAGGTGGCTTGTGGGAGGAGGCCAATTGAAAGAGAAGGGTCTAAGATGTTGAATCTGATTGATTGGGTTTGGGGCCTTCACTCTGAAGGAAAAGTGATTGAGGCAGCTGATAAAAGGTTGAATGGGGAGTTTGAGGAGGAGGAGATGAGGAAATTGTTGATTTTGGGGTTGAGTTGTGCTAATCCTGATAGTGCTGAGAGACCCTCCATGAGGAGAGTGCTGCAAATTCTAAACAATGAGGCTGCACCACTTGCTGTGCCAAAAGTGAAGCCAACACTCACCTTTTCTTCTGACCTACCTCTGCCTCTCACTATTGAGGACATTGTTTCAGAGGCTGATCAAGAGTCTATGTGCGAGATCAAAATTGACTGA 1956 0.4934 MAMDFTFFFFFFILTLLLWEVAVADNVSFDFPSFTLNNITLLGDSSLRNNGVVRLTNAAPTSSTGAVVYSQPVSLFHASFSTTFSFSIHNLNPTSSGDGLAFFLSPNTTLSLSGPLGLPTATGFVAIEFDTRLDARFDDPNENHVGFDVDSMKSLVTGDPILDGIDLKSGNTIAAWIDYSTQYTLLNVFLSYSRSSKPLLPLLSVKFDLSHHLRDPVYVGFSASTQGSIELHHIKNWTFHAKTITTTLHHPHNVSVVGISRSGATKKRDKRVVGIVAGSVSFFVAFTIFLGYVFVRRWKIGGRKEREKDKFQKSGFVAYPREFHYKELKSATKEFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLAELNTIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGKLLSWSHRQNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGRRPIEREGSKMLNLIDWVWGLHSEGKVIEAADKRLNGEFEEEEMRKLLILGLSCANPDSAERPSMRRVLQILNNEAAPLAVPKVKPTLTFSSDLPLPLTIEDIVSEADQESMCEIKID* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0116 651 Gene3D Transferase(Phosphotransferase) domain 1 411 614 - -
Gso14g0116 651 Gene3D Phosphorylase Kinase; domain 1 299 410 - -
Gso14g0116 651 Gene3D - 24 263 - -
Gso14g0116 651 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 20 625 - -
Gso14g0116 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Gso14g0116 651 PANTHER - 20 625 - -
Gso14g0116 651 ProSiteProfiles Protein kinase domain profile. 335 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0116 651 Pfam Protein kinase domain 336 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0116 651 CDD STKc_IRAK 341 607 - -
Gso14g0116 651 CDD lectin_legume_LecRK_Arcelin_ConA 27 239 IPR001220 GO:0030246
Gso14g0116 651 SMART serkin_6 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0116 651 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Gso14g0116 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 241 IPR013320 -
Gso14g0116 651 Pfam Legume lectin domain 27 249 IPR001220 GO:0030246
Gso14g0116 651 SUPERFAMILY Protein kinase-like (PK-like) 316 628 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0116 Gso-Chr14 1050966 1052955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0116 7 642 Receptor kinase-like Gene Family AT5G55830 57.589 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso14g0116 Pkinase 9.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0116 - - gmx:102668712 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0649 18 7153455 7155783 Gso14g0116 14 1050966 1052955 PCT
Gso14g0116 14 1050966 1052955 Gso18g0649 18 7153455 7155783 PCT