Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0104 ATGAATTCTAGGTGCTTCCTTGTTCATCCGCAACAAGAGTATAGCATGGTTCCATTTTCTTCAAATTCTGCCACAGAAGATAGAGTGGCTAGTGCTCGAAACAGGCCTCCACGTGTCACCCCTCCTTCCTTTATGGTTCGGATGGCCATGAGAATATCTAGAGCAAGATGGTTTACCTTTTTGAGAAGAGTTTTTCATTACCAAAATGGATCAAGGTCCAACCTTGGCTCCAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTTATTGCCTTGATTCTCCAAATAACAATTACAACGTTCACTTTGGCCATTTCCAAGAGGGAGAGACCTATTTGGCCGATGAGGATTTGGATTTCTGGATATGATATTGGCTGTGTTCTTAATCTGCTTCTACTTTATGGACGCTACCGTCAAATTTATCTAACTCAAGGAGATTCTCTCAGTCTTTCTGATATGGAACAGCAGAGAAACAATGAAGAAACCAGGATGTCACACTTGATGAATAAATGCCGGACTTCACTTGAGCTTTTCTTCGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGATCTTTTCATCATGCTCCAAAGCTCCATGTGCTCTGCATCATTCTCCTTGCTTGGAATGCAATGTGCTACTCTTTCCCTTTCCTACTGTTTGTGTTGTTATGCTGCTGTGTGCCACTAATTAGCACCCTCCTCGGCTACAACATGAACATGGCCTCTTCCAATAAAGGAGCTTCTGATGATCAAATTTCACAACTTCCAAGTTGGAGACATAAAGAAGCCGGTGTCAAGTTAGAGCTTGGCAATGGCTCTGAAGGCAGTAAAAAATTGATCAATGAAGACCCAGAATGCTGTATCTGCTTAGCCAAGTACAAAGACAAAGAGGAAGTTAGACAATTGCCCTGTTCCCATATGTTCCACCTAAAATGTGTGGATCAATGGCTAAAAATTACATCATGTTGCCCTCTTTGCAAACAAGGATTAGAGAGGTAG 1020 0.4196 MNSRCFLVHPQQEYSMVPFSSNSATEDRVASARNRPPRVTPPSFMVRMAMRISRARWFTFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALILQITITTFTLAISKRERPIWPMRIWISGYDIGCVLNLLLLYGRYRQIYLTQGDSLSLSDMEQQRNNEETRMSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHHAPKLHVLCIILLAWNAMCYSFPFLLFVLLCCCVPLISTLLGYNMNMASSNKGASDDQISQLPSWRHKEAGVKLELGNGSEGSKKLINEDPECCICLAKYKDKEEVRQLPCSHMFHLKCVDQWLKITSCCPLCKQGLER* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0104 339 CDD RING-H2_RNF111_like 291 334 - -
Gso14g0104 339 ProSiteProfiles Zinc finger RING-type profile. 293 334 IPR001841 -
Gso14g0104 339 SMART ring_2 293 333 IPR001841 -
Gso14g0104 339 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 22 338 - -
Gso14g0104 339 Pfam Ring finger domain 292 334 IPR001841 -
Gso14g0104 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 338 IPR013083 -
Gso14g0104 339 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 22 338 - -
Gso14g0104 339 Coils Coil 151 171 - -
Gso14g0104 339 SUPERFAMILY RING/U-box 285 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0104 Gso-Chr14 944206 947184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0104 36 337 C3H Transcription Factor Family AT4G26580 70.066 6.55e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0104 - - gmx:100813670 687.567