Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0095 ATGGCGGGAACCCTAAATCTCACGCCTCTCACCGGTGCCGGCAGGACTCTCCGGCCTCCGTTCAGGATCTCAATTCGGGCATTCACGGCGACGGCGATCGATTCCCGGCGAGCGGCGAGCCTCTATGAGGTGCTCCGGATCAAGCAGAACGCTTCGGCGGTGGAGATAAAGTCGGCATACCGGAACCTTGCGAAGGTGTATCACCCTGATTCGGCGCTCCGTCGGTCGGAATCGGACGAACGGGACTTCATCGAGATCCACGACGCTTACGAGACGCTGTCGGATCCGTCGGCGAGAGCACTGTATGATCTGTCGTTGATGGCGGCGCGCGATGATAATCGCTCGTTCTCGTCTTTGGTTGCTGCTCCGAATGGCTCTTCCGGATTCTACTATCAGACCCGTAAGTGGGAAACGGACCAGTGCTGGTAG 429 0.5897 MAGTLNLTPLTGAGRTLRPPFRISIRAFTATAIDSRRAASLYEVLRIKQNASAVEIKSAYRNLAKVYHPDSALRRSESDERDFIEIHDAYETLSDPSARALYDLSLMAARDDNRSFSSLVAAPNGSSGFYYQTRKWETDQCW* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0095 142 ProSiteProfiles dnaJ domain profile. 40 106 IPR001623 -
Gso14g0095 142 CDD DnaJ 42 95 IPR001623 -
Gso14g0095 142 Pfam DnaJ domain 41 103 IPR001623 -
Gso14g0095 142 PRINTS DnaJ domain signature 42 60 IPR001623 -
Gso14g0095 142 PRINTS DnaJ domain signature 60 75 IPR001623 -
Gso14g0095 142 PRINTS DnaJ domain signature 78 98 IPR001623 -
Gso14g0095 142 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 20 142 - -
Gso14g0095 142 SUPERFAMILY Chaperone J-domain 40 117 IPR036869 -
Gso14g0095 142 Gene3D DnaJ domain 28 124 IPR036869 -
Gso14g0095 142 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Gso14g0095 142 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 20 142 - -
Gso14g0095 142 SMART dnaj_3 39 98 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0095 Gso-Chr14 851140 852003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0095 42 103 C2H2 Transcription Factor Family AT1G74250 45.455 7.72e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0095 - - gmx:100786034 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0616 18 6743827 6744668 Gso14g0095 14 851140 852003 PCT
Gso8g2787 8 45625894 45627241 Gso14g0095 14 851140 852003 PCT
Gso14g0095 14 851140 852003 Gso18g0616 18 6743827 6744668 PCT
Gso14g0095 14 851140 852003 Gso8g2787 8 45625894 45627241 PCT