Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0080 ATGGAAGCAAACAAGGAGGAAGCACTTAAAGCGATAGAGATTGCTGAAAAGCGCTTTGCTCTGAGAGACTTTGCCGGTGCAAAAAACTATGCTGTAAAGGCTAAAACGCTCTGTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACATTTGAAGTTTACATTGCTTCTGAGGTCAAACATAATGGTGAGCTAGATTACTATTCGATTCTTGGATTAAAACCTTTTGCAGATAAGGAGGCTGTAAAGAAACAGTACAAGAAGTTGGCGGTGTTGCTTCACCCAGATAAGAACAAATGTGTGGGAGCTGATGAGGCATTTAAGCTTATTTCTGAGGCTTGGACTTGGCTATCAGATAGTGCTATGCGCAGTTCTTATGATCTCAAGAGAAATGTGCAGTTGGGTGGGACTAACCAGACGAATTTGTCTCCTGCCCATGCTACAGGGGCCGCAGGTTATAACAAGTGTTCCAATTTGTCAACCCCTTGTGGTGGGCTTGACACCTTTTGGACAATCTGCACCTCTTGTAAGGTTCAGTATGAGTATCTGCGCAAGTATGTGAATAAAAGACTCTCTTGTAAGAACTGTCGTGGCACTTTTGTTGCTGTTGAAACTGGGGCGGCCCCAGCAAATGGTTCGTTTCCATATTGTCCTTGGTCATATGTAGCAGGAAATGGGTATGGAAGTCATTCATTTGATGGAGTTGCATATGTTCCAACTAGTGCCCCCTATTTCAATGGGAATGGGGTCACAGGATACCATTCTGGACATGGATATGAGTACGTTCCAAACGTTTCATTTCAGTGGGGCTCTGCTGGAGTTGTCAACCAAAATGGATCAGCTACCTTACCTGCTGATTCTGTTCATCAGGCCAATGGAAATGTGAAGAGGGGAAGACCAAAAGTCAAGTCAGGAGCTGATAAGAGACATCACATGGTAGAGACTATGGTCAATACAAATTCAGACGTACCATTCTCCTGTAGTGAACCACAGGAAGATAAACTAAGTAGACCTGACAAGAAACAGAAAGTTGTTGTGGGAGCCAGTTTCAGAAATGGCTATGATGAAAAGGGTTCAAAACGTGCTTCAGAGTCGATAGTGGCTAACGGAAATGATAGCATGGGACATGGCCAAAAGCCTTCCTGCACAGTCGAAGTTCAAACCAAACAGTGTTCCATGGCACCGGCCTTTGACGCAAGAAAATTGTTGATTGAGAAAGCCAGGAAAGAAATCAGGAAGAAACTGGAGGAGATGAGGTTGTCGTCTGAAGCAGCAGCAACAGCAGCTGCAGCTCTGAATGAGAAAGAAAAATCACAAGCTGAAGTTGGTCAAGTAAAAAGAGAGACATGTAGAAAAGCAGCTCCGATTGTTTCTGGTCTACAGTTAGAGAATGGGAAAACTGGTCCAATCTCAATTACTGTTCCAGATTCTGACTTTCATGACTTTGACAAAGATAGGTCAGAGGAATGCTTCAGGCCAAAGCAAATATGGGCCTTGTATGATGAGGAAGATGGAATGCCACGGTTGTATTGTATGATCCGTGAGGTTGTGTCTGTCAATCCATTTAAGATTCACATCAGTTACTTGAGTTCCAAAACTGATAGTGAGTTTGGCTCAGTAAACTGGCTTGATTCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCTTTTAATTCAGATGCTGTTGATCAAGTTAACATATTTTCTCATGTTCTAAGTAAGGAGAAGGCTGGTCGAGGTGGTTGCGTTCGAATATATCCCAGAAGTGGAGATATTTGGGCTGTGTATCGAAATTGGTCGCCGGATTGGAACAGATCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTAGTCCTCTTATTAAGTTGGCTGGATTTAAAACTGTATATCAGAGTAATACAGACAAGAGTGCCATAAAATGGATACCCAGAAGAGAGATGTTGTGCTTTTCACATCAAGTGCCTTCTTGGTTGCTGAAGGGGGAGGCTAGCAATTTGCCTGAAAGGTGTTGGGACCTTGATCCGGCTGCAACTCCAGATGAGCTTCTTCATGCTGCTACAGAACCTAATGCTTTGTAG 2124 0.4341 MEANKEEALKAIEIAEKRFALRDFAGAKNYAVKAKTLCPGLEGISQMVATFEVYIASEVKHNGELDYYSILGLKPFADKEAVKKQYKKLAVLLHPDKNKCVGADEAFKLISEAWTWLSDSAMRSSYDLKRNVQLGGTNQTNLSPAHATGAAGYNKCSNLSTPCGGLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVAGNGYGSHSFDGVAYVPTSAPYFNGNGVTGYHSGHGYEYVPNVSFQWGSAGVVNQNGSATLPADSVHQANGNVKRGRPKVKSGADKRHHMVETMVNTNSDVPFSCSEPQEDKLSRPDKKQKVVVGASFRNGYDEKGSKRASESIVANGNDSMGHGQKPSCTVEVQTKQCSMAPAFDARKLLIEKARKEIRKKLEEMRLSSEAAATAAAALNEKEKSQAEVGQVKRETCRKAAPIVSGLQLENGKTGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVSVNPFKIHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAFNSDAVDQVNIFSHVLSKEKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLIKLAGFKTVYQSNTDKSAIKWIPRREMLCFSHQVPSWLLKGEASNLPERCWDLDPAATPDELLHAATEPNAL* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0080 707 Pfam Domain of unknown function (DUF3444) 471 677 IPR024593 -
Gso14g0080 707 MobiDBLite consensus disorder prediction 320 343 - -
Gso14g0080 707 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gso14g0080 707 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gso14g0080 707 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gso14g0080 707 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
Gso14g0080 707 Gene3D DnaJ domain 55 148 IPR036869 -
Gso14g0080 707 Pfam DnaJ domain 66 127 IPR001623 -
Gso14g0080 707 CDD DnaJ 66 119 IPR001623 -
Gso14g0080 707 SMART dnaj_3 65 122 IPR001623 -
Gso14g0080 707 Coils Coil 428 448 - -
Gso14g0080 707 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gso14g0080 707 PANTHER BNAC03G44070D PROTEIN 1 700 - -
Gso14g0080 707 Coils Coil 404 424 - -
Gso14g0080 707 PANTHER BNAC03G44070D PROTEIN 1 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0080 Gso-Chr14 715254 718682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0080 4 301 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.464 1.23e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0080 - - gmx:100788692 1437.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0080 14 715254 718682 Gso2g2592 2 50144985 50148335 GST