Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0073 ATGTCCCAAGCAACCTCGTCTTCAGCTGGTGGGGGTGATGGTGGTGCCAACATTGAACTTGGTGCAACCTTACTCCTCACCACCACCGGCAACAGCAAGTACACCAGAATATGGCGTAGAAGTTTGTACATAAGATTCCTCATCTCTGTCAAGAAGCCAACAACTTCCATCGACAACCATGAGTCGCCACCGTCACTACTTTCTTCAGTACCGTACACTTCATTGCCTCCTGCTAGAACCTCCTCTTCCGTTGCAATTGATATTAAAGAAGAAGAAACAGAAGAGCACATTAGGAGAGATATTGCTCGAATTGTAAAGGAGAAGGACTTGAGATCTCTCGGTCTGCTTGGTGGCGTTGACTCTGTTTCCGCTGTCCTATGTCGTCAACATCAACACTCAAAGGGCAACACCACTATACCATTACCAGTTCTTGGAACAAACTTGTCCAAGTTTTTATTCAACAGCTGCAAGGTCTACCGTTGCACAATTCTGGTGATGTTAATCTCCGCTGGGTTGTCATTCGCCATAGGATTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGGTGTTGCTATAGTTTTTGCTGTTTTACTACTGGTTGCAGTAACTTCAGTAGCAAACTTTTGGCGTGAGAGGAAAATGTTGAAATTGGCAAAGACAAAGGTCGAGTTGCAATTCAGGGTTAAGAGAGGTGAAGAGACCCTAATGGTTCCCAGATCTAATATTGTGGTTGGTGACAGAGTATGCCTGTGGCCAGGTGATGAGATTCCAGCAGACGGTTTGCTTGTAAGTGATGGCATCCTTTTGCTGGCTGAGCCTGAGGCAACAAAAAGCAAACATGATCCTAAGGGGAACCCGTTTCTTATATCTGGTTCAAAGGTGATTGGGGGCCAGGGAAGGATGGTGGTAACATCAGTTGGAACCAACACCAATTTGGCTGAAAGGAGGGGCTTGTTGGAGCGACTAATCGAGAGGCCAATTTCTTACATTGACATAGCTGCTCTTTTTATCTCACTACTGGTTTTACTTGTGATCTTCATTCGCCTAATTTCTGAAAAAGATGGGAACAATAGTGGGCTGCCTGAAATGAAGGGGAAGGTCTCAATTGGCTTGTTGATGAAGGCACTTCAGAGAGCTTTCTTGAAACCACAAGGAACGGTTTCCACTTTAACACGTCTTGTCACTGTTGCAATACTATGCGTGCAGCATGGAATGCCACTTGTGGTCACAATTTCTCTCAAGTACCAGATGGATAAGATAGTTCCAAAGGAAGATGCTGTTCTTAATGATTTATCAGCTAGTACGACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCAGGTGAGCTCATATCTAAACCAATGGAGGTTAGCAAAGTATTGATCGGGCAGAAAGATGTCAGCATGGTTGAGGGATCAGAAATAGATACAACTGCGCTTGACATGCTTAAACAAGGAGTTGGTTTATCAATCCTTGCACCAGAGATTTCTCTTTCCTCTTTGTCTAATTCACTTGTTTCTTGGGCAGAAAAAACATTGGAAGTGAACTTGAGATCTTTCACAGAAGAGAAATTTGACATTCTTAAGCACAGCAATCTGAATTCTGGCAAAGAAGGCAGCGGAGTTTTGGTAAGAAAAATTGGGGACAATGAACAAGTTCTGTACATGCACTGGAGTGGAGCTGCATCCACAATATTGGATATGTGTTCACAGTACTATGATAGTACAGGGGAATTCCATGCAATCAAAAACCAGAAGATCAAATTTGGGCAGGTGATTGAAGAGATGAAGGATGGTGGCCTTGAGCCAATTGCTTTTGCTTATAGAGAAACAGATGGAAAAGAACTTGAGAAAGGACTGATCTTGTTAGGACTGATAGGTCTCAAATGCACTACTAGTCTAGAATCCATAAAATCAGGTTTGGAAAATCTGAAAAAAAATGATGCAAATATACAGATCAAACTGGTCTCGGAGGATGGCATCATGGAAGTGAAAGGCATAGCTTGTGGACTAGGACTAGAATATGATAATGTGCTTGAAGGAAAAGAGCTTCGGGATTTGAATGGGGAAGCTAGATTAGACAAAGTGGATCAAGCCCATGTAATGGGAAGCTTCCATCCTAAAGACAAACTTCTCATGATACAGTGCTTGCAAGAGAAAGGTAAGGTGGTTGCATTCATTGGAACAAGGTTGATGACTAATCATTCTTCAGTTCTGAAGGTAGCTGATGTGGGGATAGTTTTTGATCCTCTGAGAACAATAGTGGATATAGATAGTTGTGACATAACAATCAAATTTTTCAGTGTATTGGAACCAATTGTGATGGCTGGCAGAAGTCAATACCGCAATATTCAGAAGTTCATTCAACTTCAGCTGACATGCACCATATCAGGGTTAGTCATAACCTTGATTACAACATGTACTGGAGATTCCCCCCTTGCAGCATCCCAGTTAATTTGGGTGAATGTCTTGATGTGCATTCTGGGTGGCCTAATGATGGTATTGAAGCTAACCGGCGAGGAGGAACAGATTGCTAAACAACCATCTGATCATAGGAACCAACATATTGTAACCAAAGAAATCTGGAAAAACGTTGTTATTCAGGTTTTATATCAGACTTCTGTGTCAATGATACTTGAGTTCGGTGGAGATGTTACTGACAAGGAAAAAAAGGTTAGGGAAACCATGATCTTCAACACATTCCTATTTTGCCAACTCTGCAATTTTCTCAACTACCAGGTTTTGAAGATGGTTGTTCAGAGCTTCTATTTCTTGGTGGCCTTAGGTGGTTGTTTTCTTATGCAAGTGCTGGTGATTGAGTATGCTAAAGGCCTAGCAGATTGCATGCGGCTGAATGCTGCGAGATGGGGTATCTGTGTCTTGATTGGTGCTCTTGCATGCGTATTTGAATGGACGTTGAAGAATATTCTTCCAGTTATTCTCAATCCTAGCACCAACATTGCTTCAGAATCAATTACTTCACCTTCGTTCTATCTTTCTCCAGTATTTCCAATTCTGATGTTCGTTCTGTTCCCTGTAGGACTAATTTTTAGTCAAATAGGCATGAACATGACAATTCGTTAG 3090 0.4217 MSQATSSSAGGGDGGANIELGATLLLTTTGNSKYTRIWRRSLYIRFLISVKKPTTSIDNHESPPSLLSSVPYTSLPPARTSSSVAIDIKEEETEEHIRRDIARIVKEKDLRSLGLLGGVDSVSAVLCRQHQHSKGNTTIPLPVLGTNLSKFLFNSCKVYRCTILVMLISAGLSFAIGFKQEGPKHGWHDGVAIVFAVLLLVAVTSVANFWRERKMLKLAKTKVELQFRVKRGEETLMVPRSNIVVGDRVCLWPGDEIPADGLLVSDGILLLAEPEATKSKHDPKGNPFLISGSKVIGGQGRMVVTSVGTNTNLAERRGLLERLIERPISYIDIAALFISLLVLLVIFIRLISEKDGNNSGLPEMKGKVSIGLLMKALQRAFLKPQGTVSTLTRLVTVAILCVQHGMPLVVTISLKYQMDKIVPKEDAVLNDLSASTTMGLVTVICIDVSGELISKPMEVSKVLIGQKDVSMVEGSEIDTTALDMLKQGVGLSILAPEISLSSLSNSLVSWAEKTLEVNLRSFTEEKFDILKHSNLNSGKEGSGVLVRKIGDNEQVLYMHWSGAASTILDMCSQYYDSTGEFHAIKNQKIKFGQVIEEMKDGGLEPIAFAYRETDGKELEKGLILLGLIGLKCTTSLESIKSGLENLKKNDANIQIKLVSEDGIMEVKGIACGLGLEYDNVLEGKELRDLNGEARLDKVDQAHVMGSFHPKDKLLMIQCLQEKGKVVAFIGTRLMTNHSSVLKVADVGIVFDPLRTIVDIDSCDITIKFFSVLEPIVMAGRSQYRNIQKFIQLQLTCTISGLVITLITTCTGDSPLAASQLIWVNVLMCILGGLMMVLKLTGEEEQIAKQPSDHRNQHIVTKEIWKNVVIQVLYQTSVSMILEFGGDVTDKEKKVRETMIFNTFLFCQLCNFLNYQVLKMVVQSFYFLVALGGCFLMQVLVIEYAKGLADCMRLNAARWGICVLIGALACVFEWTLKNILPVILNPSTNIASESITSPSFYLSPVFPILMFVLFPVGLIFSQIGMNMTIR* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0073 1029 Gene3D - 162 441 - -
Gso14g0073 1029 PANTHER CATION TRANSPORTING ATPASE 74 996 - -
Gso14g0073 1029 Gene3D - 442 454 IPR023214 -
Gso14g0073 1029 SUPERFAMILY HAD-like 445 831 IPR036412 -
Gso14g0073 1029 Gene3D - 769 986 - -
Gso14g0073 1029 Gene3D - 455 480 IPR023299 GO:0000166
Gso14g0073 1029 Gene3D - 492 631 IPR023299 GO:0000166
Gso14g0073 1029 Gene3D - 213 321 - -
Gso14g0073 1029 PANTHER CATION-TRANSPORTING ATPASE PLANT 74 996 - -
Gso14g0073 1029 Pfam Cation transporting ATPase, C-terminus 813 976 IPR006068 -
Gso14g0073 1029 SUPERFAMILY Calcium ATPase, transmembrane domain M 160 980 IPR023298 -
Gso14g0073 1029 Gene3D - 633 768 IPR023214 -
Gso14g0073 1029 Pfam E1-E2 ATPase 227 414 - -
Gso14g0073 1029 SUPERFAMILY Calcium ATPase, transduction domain A 226 316 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0073 Gso-Chr14 645469 649546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0073 33 985 Primary Pumps ATPases AT3G63380 33.074 5.85e-128 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0073 K01537 - gmx:102661547 1913.66