Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0063 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGTATGTACTATCAACCATTACAACAAATTGAAGCATACTGCTTGCCGCAGTATCGGAGTCGAAATCAACAGCTATACTACCATGATGGAGGCCATGGAACTCACTTTTCAACTCCAAGTTCTTCAGAACTTTACTGCACTTTGGAGTCATCTTCTGTAGCTGGCAGTTTCACTCTATACAACTCCCCTTCAACTGTTAGTTTCTCACCCAACGGTAGCCCCATATCGCAGCAAGACTCTCAGTCATATCCACCTGACCAGTATCATTCTCCTGAGAATACCTATGGCTCTCCTATGAGTGGCTCCTGCATAACTGATGATTTAAGCAGCCTCAACTTCAAGCACAAGCTCAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGAGAGTGCCATCAGCAATGGAAACAACTCCGTTCCACTTGAGATGGACAGTTGGAGACAAACAATGGTGGCAATTTCTAGCAAAAACCTAAAGCACATCCTTATTGCATGTGCCAAAGCCATTTCAGACAATGATTTGCTAACGGCACAATGGCTGATGGATGAATTAAGGCAGATGGTGTCAGTTTCTGGCGATCCGGTTCAACGGTTGGGAGCATACATGTTGGAAGGACTTGTTGCCCGATTGGCCGCCTCTGGGAGTTCAATATACAAATCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCCTACATGCACATATTGTATGAGGTTTGCCCCTACTTCAAGTTTGGGTACATGTCTGCAAATGGAGCCATTGCAGATGCCATGAAAGATGAAGACAGAGTTCACATAATTGATTTCCAAATTGGTCAAGGAAGCCAGTGGATAACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATCCGGATTACAGGTATTGATGATTCAACATCGGCTTATGCTCGCGGTGGTGGACTACACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCAGGTTTTGATGTTCAACTACATAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCCGTAAATTTTGCATTCATGCTACATCACATGCCGGATGAAAGTGTGAGTACTCAGAATCACAGGGATAGGCTGTTGAGGTTGGTTAGGAGCCTATCACCAAAGGTGGTGACACTTGTTGAGCAAGAATCTAACACGAACACTGCTGCATTCTTTCCGCGTTTCCTTGAAACTCTGAACTATTACACAGCAATGTTTGAGTCAATAGACGTGACTCTTCCCAGAGAGCATAAAGAGAGAATCAATGTTGAGCAGCATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGACACGAGGTGCTTGGCAAGTGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCGTTGGTGAATGGTACCATAAAGAAATTGCTTGAGAACTACAGTGATAGATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCTTGGAAATGA 1638 0.4444 MQASEQHRSSSMYYQPLQQIEAYCLPQYRSRNQQLYYHDGGHGTHFSTPSSSELYCTLESSSVAGSFTLYNSPSTVSFSPNGSPISQQDSQSYPPDQYHSPENTYGSPMSGSCITDDLSSLNFKHKLRELESVMLGPDSDNLDSYESAISNGNNSVPLEMDSWRQTMVAISSKNLKHILIACAKAISDNDLLTAQWLMDELRQMVSVSGDPVQRLGAYMLEGLVARLAASGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIADAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGFDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLEERDGALYLGWMNRDLVASCAWK* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0063 545 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 545 - -
Gso14g0063 545 Pfam GRAS domain family 175 545 IPR005202 -
Gso14g0063 545 MobiDBLite consensus disorder prediction 78 106 - -
Gso14g0063 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Gso14g0063 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 545 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0063 Gso-Chr14 563492 567234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0063 12 545 GRAS Transcription Factor Family AT5G48150 65.683 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso14g0063 GRAS 3.5e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0063 - - gmx:100808300 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0063 14 563492 567234 Gso2g2601 2 50238296 50241690 GST