Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0062 ATGGTTTCTACAGACAAAAGTGCGGATCAAAATATCCCTTCTGATGAATTGCAGCAGAGAGTGAGTCCTGATAGTGATACTACATTGTCACAAGGTCATGATACTAAAAATGATCTGTCCAAACCAGAAGAAGCAACAAGTATTCTTTCTATTGTAGTTAAAAATGAAGGGAAGGATTCTGATGCTACTGCTTGTGCCTTGGAATCAGATCAAGAAGGAAGCACATGCTCTTTGCCACTTGGGAAACCTTTGCAAAGCCCTGATACTCTTTCACACGAATTTCCTCGATTGCAGTCCAGTCAGGAATGTCCCTCTATAATACGTGAAAAGGTATCAAAAGATGGCTATAACTGGCGAAAATATGGTCAGAAACATGTTAAGGGGAATGAATTTATAAGGAGCTATTACAAGTGTACACATCCTAACTGCCAGGCAAAAAAGCAATTGCAGCAGTCAAATAATGGGCATATCACGGACTCCATTTGTATCGGTCAGCATAATCATCCCAGACCTCAATTGAACTCCACAGTATCAGTTGAGTGTGTTCTGCCTGTTGTTGAACAAGCACCACACAAACCCTCTCTAGCCAATGTGGAAGACAAAGCATCCGTTGAGCATGGATGTATGCCTCAACAGATCAAGCCTTTACAATCCTTTCCTCCTGCAAAAGTTTCCCCAGTTAATGAGTTGAAAGCTGCACATTTACAATTGACTAAGGCAAAGAATCAGGTTCATGATAACAAGGAACCTGAGTCAAAGCGGCTGAAGAAAGACAATAGTAATGCTGATGTCGCTAGAGTTGACATGTCAACACGGGAATCTCGTGTTGTTGTTGTTCAGACTTCAAGTGAGGTTGATCTGGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAGCTAGTTAAAGGGAATACAAACCCAAGAAGTTATTATCGATGCTCGAATCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTTATGATTCAAAAACTGTAATAACTACCTATGAGGGACAGCATGATCATGAAATTCCCCCTGGAAGGACTGTCACTCAGAATGCAGCTACAAATACTCGCACAACGGCCACTAATGGCAAGGCAGGAACCAAATCTGAGGGTAATACTGATGATACAGGGGAGCGAAGCGGCTTGGGCTTAACAAGCAGATTAACAGAGCAACAAACTGGCAAGTCGACTACTAAGTCAAAGGCTGGTGATATGGTTGAGTTTCGTGTGATCAGGCTTTCTAATGAGGGTCCTGAAATTAAATTAAGTGAGCAACAACAACAAAAGGATAACTCAGCTACTAAAGATGATTCTGTCAGCAATGACGTTATATGCCATTCAAGTTCTGGAGTTCTGTGTAGATCAAATGAACAGCTGAAAGGTGAGGTAAAACCTATATCAGAAGGAAGTAAGGATTGCCTTAAGGTGGTTGCCGTTCATGATACTCCTAGTACAGAAAGTGAATTTAACAAGCAATCCGCAGCTGATGCTGAACCGGTCCAAAGCTAA 1524 0.4213 MVSTDKSADQNIPSDELQQRVSPDSDTTLSQGHDTKNDLSKPEEATSILSIVVKNEGKDSDATACALESDQEGSTCSLPLGKPLQSPDTLSHEFPRLQSSQECPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLQQSNNGHITDSICIGQHNHPRPQLNSTVSVECVLPVVEQAPHKPSLANVEDKASVEHGCMPQQIKPLQSFPPAKVSPVNELKAAHLQLTKAKNQVHDNKEPESKRLKKDNSNADVARVDMSTRESRVVVVQTSSEVDLVNDGYRWRKYGQKLVKGNTNPRSYYRCSNPGCPVKKHVERASYDSKTVITTYEGQHDHEIPPGRTVTQNAATNTRTTATNGKAGTKSEGNTDDTGERSGLGLTSRLTEQQTGKSTTKSKAGDMVEFRVIRLSNEGPEIKLSEQQQQKDNSATKDDSVSNDVICHSSSGVLCRSNEQLKGEVKPISEGSKDCLKVVAVHDTPSTESEFNKQSAADAEPVQS* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0062 507 MobiDBLite consensus disorder prediction 1 35 - -
Gso14g0062 507 ProSiteProfiles WRKY domain profile. 283 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 458 IPR044810 GO:0003700
Gso14g0062 507 SMART WRKY_cls 288 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 SMART WRKY_cls 112 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 MobiDBLite consensus disorder prediction 486 507 - -
Gso14g0062 507 Pfam WRKY DNA -binding domain 113 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 MobiDBLite consensus disorder prediction 424 447 - -
Gso14g0062 507 MobiDBLite consensus disorder prediction 341 408 - -
Gso14g0062 507 Gene3D WRKY domain 273 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 Gene3D WRKY domain 100 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 MobiDBLite consensus disorder prediction 1 45 - -
Gso14g0062 507 SUPERFAMILY WRKY DNA-binding domain 108 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 MobiDBLite consensus disorder prediction 242 262 - -
Gso14g0062 507 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 458 - -
Gso14g0062 507 MobiDBLite consensus disorder prediction 72 99 - -
Gso14g0062 507 ProSiteProfiles WRKY domain profile. 107 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0062 507 MobiDBLite consensus disorder prediction 488 507 - -
Gso14g0062 507 MobiDBLite consensus disorder prediction 422 447 - -
Gso14g0062 507 MobiDBLite consensus disorder prediction 352 405 - -
Gso14g0062 507 SUPERFAMILY WRKY DNA-binding domain 280 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0062 Gso-Chr14 558407 562321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0062 97 370 WRKY Transcription Factor Family AT2G04880 47.368 3.05e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g0062 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0062 K18834 - gmx:100781219 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0062 14 558407 562321 Gso2g2602 2 50243288 50247277 GST