Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0033 ATGGCGCAGCTTCCGTGCGACTCCGATGGCGTCTGCATGCTCTGCAAACTCAAACCCAGTCCCTCCCAAACCCTCTCCTGTGGAACGTGTGCCACTCCCTGGCACCTTCCGTGTCTCCCTTCGCCCCCTCTCTCCCTCTCTGACTCCCATTGGGACTGCCCCGACTGTTCTGACACCTTCTGCCATCACCCCGTCGCTCCCACCGCTCACCTTGTCTCCGCCATTCACGCCATTCAGGCCGACACCTCTCTCACTGACCAACAGAAGGCCATAAAACGCCAACAACTCCTCGCTGGCTCTGCCCACCCCTCAAAGGACAAAACCAAAGCCAAAGACATTTTTGATGGAAGCTTAAACTGCTCCATATGCATGCAACTACCCGATAGACCCGTCACGACGCCTTGTGGGCACAACTTCTGTTTGAGATGTTTCGAGAAGTGGATCGGACAGGGAAAGCGCACTTGCGCCAATTGCCGTGCTCAAATCCCGACCAAGATGGCGAGCCAGCCGAGAATCAATTCTCAGTTGGCCATGGCCATCCGATTGGCGAAGGCAGCCAAGTCGGAAGGTTCTTCGGGCCCACCCAAGGTCTATCATTTTGTACGCAATCAGGACCGTCCTGATACCGCATTCACCACAGAGCGAGCCAAGAAGACTGGAAAGGCAAATGCTTGCAGTGGTAAGATTTTCGTGACTGTTCCTCCCGACCATTTTGGGCCTATCCCGGCTGAAAACGACCCCACCCGGAACCGTGGTGTTCTGGTCGGGGACACGTGGGAGGACCGGATGGAGTGTCGGCAGTGGGGTGCCCATTTGCCTCATGTCGCCGGCATTGCTGGACAGAGTGCTTATGGTTCCCAGTCTGTTGCCCTTTCTGGTGGCTACGAGGATGACGAGGACCATGGTGAGTGGTTCCTCTACACTGGCAGTGGTGGCAGAGATCTCAGTGGCAACAAACGCACCAACAAGCTACAATCCTTTGACCAAAAGTTTGAAAACATGAATGAGGCCTTGAGAGTAAGCTGTAGGAAGGGTTATCCCGTTCGCGTTGTAAGGTCGCACAAGGAAAAACGTTCTTCTTATGCACCGGAATCTGGAGTGCGTTATGATGGAGTTTACAGAATAGAGAAATGCTGGCGTAAAAATGGAATACAAGGTTGCAAGGTTTGCAGGTATTTGTTTGTGAGATGTGACAATGAGCCAGCACCGTGGACAAGTGATGAAATTGGAGATCGCCCACGCCCACTACCTAAAATTGATGAGTTGAAGGGTGCAGTTGATGTAACTGAAAGAAAGGGTGATCCATCATGGGATTATGATCCGGAGAAGGGGTGCTGGTTGTGGAAGAAGCCTCCACCCGAAAGCAAGAAACCAGTGGACATTAAATCTGAAAATGGAACAACAATCAGAGTTAAACGGAAAGCAGAAAATGTGTCCGTGAAAGAAAGGCTTTTGAAAGAGTTTGGTTGTCAAATTTGTCGCAAGGTTATGGCTTCCCCTCTCACTACACCTTGTGCTCACAACTTCTGCAAAGCCTGTTTGGAGGGTGCCTTTTCTGGCCAAAGTTTCATCAGAAATAGGGCATGTGGAGGTGGACGCACTTTACGAGCACAGAAAAATGTTATGAAATGCCCATCTTGTTCAAATGACATTGCTGACTTTCTCCAGAATCCACAGGTTAATAGAGAAATGCTGGCTGTTATAGAATCATTACAACGCCAGGCTGAAGAAAATTCTGAAGAGTTAAGTGATAAAAATGATGAAAATCTGCATGATCCAACAGAGGTTTCTAAACCCAGTGATTCTACTGATAAAGTCTTGGAGGAAATTAAGGACAATGAGCTGAATCAGCCACACAAGCGAAGGAAGGAGTGA 1875 0.4987 MAQLPCDSDGVCMLCKLKPSPSQTLSCGTCATPWHLPCLPSPPLSLSDSHWDCPDCSDTFCHHPVAPTAHLVSAIHAIQADTSLTDQQKAIKRQQLLAGSAHPSKDKTKAKDIFDGSLNCSICMQLPDRPVTTPCGHNFCLRCFEKWIGQGKRTCANCRAQIPTKMASQPRINSQLAMAIRLAKAAKSEGSSGPPKVYHFVRNQDRPDTAFTTERAKKTGKANACSGKIFVTVPPDHFGPIPAENDPTRNRGVLVGDTWEDRMECRQWGAHLPHVAGIAGQSAYGSQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKLQSFDQKFENMNEALRVSCRKGYPVRVVRSHKEKRSSYAPESGVRYDGVYRIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSDEIGDRPRPLPKIDELKGAVDVTERKGDPSWDYDPEKGCWLWKKPPPESKKPVDIKSENGTTIRVKRKAENVSVKERLLKEFGCQICRKVMASPLTTPCAHNFCKACLEGAFSGQSFIRNRACGGGRTLRAQKNVMKCPSCSNDIADFLQNPQVNREMLAVIESLQRQAEENSEELSDKNDENLHDPTEVSKPSDSTDKVLEEIKDNELNQPHKRRKE* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0033 624 MobiDBLite consensus disorder prediction 574 624 - -
Gso14g0033 624 Pfam SAD/SRA domain 251 399 IPR003105 -
Gso14g0033 624 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 476 599 IPR013083 -
Gso14g0033 624 ProSitePatterns Zinc finger RING-type signature. 505 514 IPR017907 -
Gso14g0033 624 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 187 IPR013083 -
Gso14g0033 624 ProSiteProfiles Zinc finger RING-type profile. 120 159 IPR001841 -
Gso14g0033 624 Gene3D - 219 414 IPR036987 -
Gso14g0033 624 ProSiteProfiles YDG domain profile. 248 396 IPR003105 -
Gso14g0033 624 ProSitePatterns Zinc finger PHD-type signature. 12 56 IPR019786 -
Gso14g0033 624 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 2 614 IPR045134 -
Gso14g0033 624 SUPERFAMILY RING/U-box 112 166 - -
Gso14g0033 624 MobiDBLite consensus disorder prediction 572 624 - -
Gso14g0033 624 Coils Coil 561 588 - -
Gso14g0033 624 CDD RING-HC 120 158 - -
Gso14g0033 624 SMART G9a_1 243 400 IPR003105 -
Gso14g0033 624 SMART ring_2 490 547 IPR001841 -
Gso14g0033 624 SMART ring_2 120 158 IPR001841 -
Gso14g0033 624 Pfam Zinc finger, C3HC4 type (RING finger) 118 163 - -
Gso14g0033 624 SUPERFAMILY RING/U-box 482 573 - -
Gso14g0033 624 SUPERFAMILY FYVE/PHD zinc finger 5 67 IPR011011 -
Gso14g0033 624 SMART PHD_3 11 57 IPR001965 -
Gso14g0033 624 Pfam RING-type zinc-finger 490 545 IPR027370 -
Gso14g0033 624 SUPERFAMILY PUA domain-like 222 416 IPR015947 -
Gso14g0033 624 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 2 614 - -
Gso14g0033 624 ProSiteProfiles Zinc finger PHD-type profile. 9 59 IPR019787 -
Gso14g0033 624 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 75 IPR013083 -
Gso14g0033 624 ProSiteProfiles Zinc finger RING-type profile. 490 548 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0033 Gso-Chr14 356815 360193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0033 3 595 C2H2 Transcription Factor Family AT5G39550 60.927 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0033 K10638 - gmx:100781044 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0033 14 356815 360193 Gso2g2629 2 50421666 50425019 GST