Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0030 ATGGCTGCACAAGCTCTTGTATCATCATCATCTCTTACCTTCTCAGCCGAGGCTACAAGACAAAGTCTTGGACCAAGATCACTCCAATCTCCATTTGGCTTCTCCAGAAAAGCCTCCTTTCTTGTTAAGGCAGCTGCTACTCCCCCTGTCAAGCAAGGATCAGACAGACCTTTGTGGTTTGCATCAAAGCAAAGTCTTTCCTACTTGGATGGCAGCCTTCCGGGTGACTATGGATTTGACCCTCTGGGACTTTCGGACCCTGAAGGAACAGGAGGGTTCATTGAGCCGAAATGGCTAGCATATGGTGAGATAATCAATGGTCGTTATGCAATGTTGGGTGCAGTTGGTGCAATAGCACCTGAAATTCTAGGCAAGGCTGGTCTGATCCCTCAGGAGACAGCACTCCCATGGTTCAGAACCGGTGTGTTCCCACCTGCAGGAACCTACAACTACTGGGCAGACTCCTACACACTGTTCGTGTTTGAGATGGCACTGATGGGATTTGCAGAGCACAGAAGATTCCAAGACTGGGCCAAACCAGGCTCTATGGGCAAACAATACTTCCTAGGACTAGAGAAGGGTCTTGGAGGTTCTGGTGAGCCAGCTTACCCAGGAGGACCTTTCTTCAACCCACTTGGCTTTGGTAAGGATGAGAAGTCCTTGAAGGATTTGAAGCTCAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCAATCTTGGGTTACTTTGTTCAAGCTCTTGTCACAGGTGTTGGCCCATACCAAAACCTCCTAGATCATTTGGCTGACCCCGTGCACAACAACATCTTGACCAGTCTCAAGTTCCACTAA 831 0.4874 MAAQALVSSSSLTFSAEATRQSLGPRSLQSPFGFSRKASFLVKAAATPPVKQGSDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNILTSLKFH* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0030 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 275 IPR001344 GO:0009765|GO:0016020
Gso14g0030 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Gso14g0030 276 Pfam Chlorophyll A-B binding protein 67 246 IPR022796 -
Gso14g0030 276 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 8, CHLOROPLASTIC 1 275 - -
Gso14g0030 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0030 Gso-Chr14 338970 340615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0030 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 83.696 3.23e-164 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0030 K08909 - gmx:100784090 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0030 14 338970 340615 Gso2g2633 2 50446152 50447669 GST