Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0021 ATGGGTTGTTGCCAATCATCGACGTTGCTGAGAGTGGGAGAGAGGGAGACTCACCCTGAAAAGGAAAAGGAAAAAGACCACCAGAGGCTCTCTGAGGCCGAGAAAGAGGGCTTTGATTTCTCCTTCTCTGAGTTCTCGCTGGCTGAGCTGAAGGCGGCCACCAACAATTTCAGCTCTGACTATATCGTGTCTGAGAGTGGGGAGAAGGCACCCAACCTTGTTTACAAGGGTCGCCTCCAGAACCATAGCCGCTGGATTGCCGTCAAGAAGTTCAGCAAGTCTGCTTGGCCTGATCCCAAGCAATTCGTCGAAGAGGCTTCCGGCGTCGGCAAGTTGCGCCATCCAAGGCTCGCTATTTTGATCGGTTTCTGCTGCGACGGCGATGAGAGGCTTCTCGTTGCCGAGTACATGCCTAATGATACTCTTGCCAAGCATCTTTTCCACTGGGAAACTCAGACTATTGAGTGGGCCATGCGGTTGCGAGTCGCTCTTTACATCGCCCAGGCTTTGCATTATTGCAGCTCTGAGGGTCGTCCCTTGTACCATGACTTGAATGCTTACCGTGTTCTCTTCGACCAGGAAGGCGATCCCCGTCTCTCTTGCTTTGGTTTTATGAAGAACAGCAGGGATGGTAAGAGTTATAGCACCAATCTTGCTTACACACCTCCTGAATATTTAAGAAATGGAAGGGTCACGCCTGAAAGTGTCATTTACAGCTTTGGAACCGTTCTTCTAGACCTCCTCAGTGGCAAGCACATCCCTCCCAGTCAAGCACTTGATATGATACAGGGGAAAAACAATATGCTCTTAATGGATTCACATTTAGAGGGGAAGTTTTCAACAGAAGAGGCAACGGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCAAGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTTGCCCCGTTGCATACAAAACCCGATGTTCGTTCTCATATCATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCACAACGTCCTCTTTCAGCAATGGGTGAGGCTTGTTCAAGAATGGACCTAACTGCAATACATCAGATCTTGGTTGCGACACACTACAGAGACGATGAAGGAACTAATGAGTTGTCTTTTCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAAGCAAGGAAGCGCGGAGACCATGCATTCCGTGACAAGGACTTTAGGACAGCCATTGATAACTATTCCCAGTTTATTGATGTTGGAACAATGGTCTCCCCAACTGTGTTTGCAAGGCGCAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCGCTACGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAATCAGTTGCTCTTGCAAAACTGGACATGCACAAGGATGCGGCTGATATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGGCAAAGAGGAGCGAGAGGATCATAG 1494 0.4833 MGCCQSSTLLRVGERETHPEKEKEKDHQRLSEAEKEGFDFSFSEFSLAELKAATNNFSSDYIVSESGEKAPNLVYKGRLQNHSRWIAVKKFSKSAWPDPKQFVEEASGVGKLRHPRLAILIGFCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSQALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVRSHIMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDHAFRDKDFRTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGARGS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0021 497 Gene3D Tetratricopeptide repeat domain 386 495 IPR011990 GO:0005515
Gso14g0021 497 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Gso14g0021 497 MobiDBLite consensus disorder prediction 13 31 - -
Gso14g0021 497 Gene3D Phosphorylase Kinase; domain 1 31 136 - -
Gso14g0021 497 MobiDBLite consensus disorder prediction 1 31 - -
Gso14g0021 497 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 495 - -
Gso14g0021 497 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 495 IPR045845 GO:0004672|GO:0009742
Gso14g0021 497 ProSiteProfiles Protein kinase domain profile. 60 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0021 497 Pfam Protein kinase domain 73 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0021 497 SUPERFAMILY TPR-like 389 490 IPR011990 GO:0005515
Gso14g0021 497 SUPERFAMILY Protein kinase-like (PK-like) 41 316 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0021 Gso-Chr14 283590 290908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0021 16 336 Glycoside Hydrolase AT3G07070 32.754 6.21e-48 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gso14g0021 Pkinase 1.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0021 K14500 - gmx:100781583 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0021 14 283590 290908 Gso2g2639 2 50488430 50498630 GST