Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0009 ATGAATCATAGGTTCTGGATGAATTTGCTTTGCGTTGCATTATTAACATTGATCCTATTACATGGGGCATCAAGAGGACATGATGATGTCGTCAAAATCGGTGCCATATTCACATTAAAAACCATAAACGGACGAGTTTCCAAAATTGCCATCCAAGCTGCTGAGAAAGATGTGAATTCCGATCCTCGCATCCTTGGGGGTCGTAAATTGTCCATAACCATCCATGATTCCAACTTCAGTGGTTTTCTTGGCTTTATTGGGGCCCTCAAGTTCTTGGTGACCGACACAGTAGCTATAATTGGTCCACAAAGTTCAGTAATGGCCCATGTGCTTTCGCATCTTGCAAATGAGCTCCATGTTCCCCTACTCTCCTCCACGGCTCTGGACCCCACCCTAACACCTCTCCAGTATCCTTATTTTCTCCAAACAGCACCCTCCGATCACTTCCACATGAATGCCGTTGCCGACCTCATTAGCTATTTCAGTTGGAGAGAAGTCATAGCAGTGTTCAGCGACGATGATCAGAGTCGGAATGGGATAACGGTTTTGGGGGATAAACTTGCTGAGAGACGCTGTAAGTTGTCTTACAAAGCAGCACTGCCTCCTGATCCGACCGCCACTCCATCCCATGTTACTGGTCAGTTAGTGAAGATCAAGAGTATGGAGTCTCGAGTTATCGTCTTAAACACCTTCGCGCAAACTGGTCTCTTGGTTTTTGAGGTGGCTCAAAAGCTAGGAATGATGTCCAAAGGGTATGTCTGGATAGCTACTGCTTGGTTATCAACTGTTTTAGACTCAACTACTTCACTACCTTCAAATACTTGTAACTCAATTCAAGGAGTTATTACCTTTCGCCCTCACACCCCTCATTCCAGAAAAAAACAGGCATTTATCTCAAGGTGGAAACACATCAGTAATGGCTCAATTGGGTTAAATCCATACGGCCTCTATGCATATGATTCTGTTTGGATGATTGCTGAGGCACTCAAATTGTTTTTTGATCGGAATGGTACCATTTCCTTCTCTAACAATACAAATTTAAGTGGTACGAGGGAAGAGACTCTGGATTTCGGTGCTTTGAGCGTTTTTGATGGAGGGAAGGAGTTACTTGATAACATATTGCGCATTAACATGACTGGATTGACTGGACCTATTCAATTTGGTTCAGATAGATCTCCTCTAAATCCATCATATGACATTCTTAATGTAATTGCTACTGGTTATAGGAGAGTCGGCTACTGGTCTAATTACTCTGGCCTCTCTGTAATAACCCCTGAGAAACTTCACGCAGAGCCTGCCAATCGTTCAATTTCAAGCCAGCATCTAAACCGTGTCATATGGCCTGGAAATACAACAGAAAAGCCTCGTGGATGGGTTTTCCCAAATAATGGGAGGCAACTGAGAATTGGAATTCCCAACAGAGTTAGCTATCAAGACATGGTCTCCCAAATAAATGGCACCAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCATTAAATTGCTTCCCTATGCAGTTCAATACAAGTTCATTCTGTTTGGAGATGGACACAATAACCCAAGCTACTACAATCTTGTCAACATGATTACTTCTGATGTTTTTGATGCTGCTGTAGGTGACATTGCGATTGTCACTGACCGAACAAAGATTGTGGATTTTACTCAACCATATATAGAGTCGGGGCTAGTTGTGGTTGCTCCAGTAAAAAAATTGAAGTCAAATGCTTGGGCTTTCTTGCGACCATTTACTCCACAGATGTGGGGTGTCACTGCATTTTTTTTCCTTTTTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACAAACGATGAGTTTCGGGGGTCACCGAGGGAACAGATAGTTACAGTTCTTTGGTTTAGTTTCTCAACCATGTTCTTTGCGCACAGAGAAAACACAGTTAGTCCACTTGGTCGAGTGGTGTTGATAATCTGGCTTTTTGTGGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTCACTGTGCAACAGCTGTCCTCACCCATAACAGGAATTGATAGCTTGATATCCAGCAGTGATCGTATAGGATTCCAAGTAGGCTCATTTGCTGCAAACTATCTCACTGAGCAACTCAACATCCCCAAACATAGACTTGTTCCTCTTGGCTCACCAGAAGAATATGCTGTTGCCCTTGAAAGCGGAACTGTTGCAGCTGTGGTGGATGAACGACCCTATGTAGAACTCTTCCTTTCAAACCACTGCCAATTCTCAATTAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTCCCGAGAGACTCTCCTCTTGCAATTGATATGTCAACTGCGATTCTAACCCTATCTGAGAATGGTGAACTTCAAAGGATCCATGAAAAGTGGCTTTCAGAAAAGGCTTGTGGTTTTCACAGTACTGAGGATGAACAGCTTAAATTAAATAGCTTCCGGGGCCTGTTTCTAATATGTGGAATAACATGTTTCCTGGCGCTTCTTATCTATTTTTTATCGATGGTACGGCAATTCAATAAAAAATCCCCTCAAAAAGTTGGTCCTTCTAATCGTTGCAGCTCACGTTCTGCTCGCATCCAGACATTTCTACATTTTGTTGACGAAAAAGAAGACGTCTCACCCAAGTTAAAAAGAAAACTCGACTATATCTCATCAAATCGTTTGAGGAGCATATCCAAGAGAGTACAAGAGGACATTTCCCAAGAGGCTCCTTGA 2748 0.4272 MNHRFWMNLLCVALLTLILLHGASRGHDDVVKIGAIFTLKTINGRVSKIAIQAAEKDVNSDPRILGGRKLSITIHDSNFSGFLGFIGALKFLVTDTVAIIGPQSSVMAHVLSHLANELHVPLLSSTALDPTLTPLQYPYFLQTAPSDHFHMNAVADLISYFSWREVIAVFSDDDQSRNGITVLGDKLAERRCKLSYKAALPPDPTATPSHVTGQLVKIKSMESRVIVLNTFAQTGLLVFEVAQKLGMMSKGYVWIATAWLSTVLDSTTSLPSNTCNSIQGVITFRPHTPHSRKKQAFISRWKHISNGSIGLNPYGLYAYDSVWMIAEALKLFFDRNGTISFSNNTNLSGTREETLDFGALSVFDGGKELLDNILRINMTGLTGPIQFGSDRSPLNPSYDILNVIATGYRRVGYWSNYSGLSVITPEKLHAEPANRSISSQHLNRVIWPGNTTEKPRGWVFPNNGRQLRIGIPNRVSYQDMVSQINGTNAVQGYCIDIFLAAIKLLPYAVQYKFILFGDGHNNPSYYNLVNMITSDVFDAAVGDIAIVTDRTKIVDFTQPYIESGLVVVAPVKKLKSNAWAFLRPFTPQMWGVTAFFFLFVGAVVWILEHRTNDEFRGSPREQIVTVLWFSFSTMFFAHRENTVSPLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLISSSDRIGFQVGSFAANYLTEQLNIPKHRLVPLGSPEEYAVALESGTVAAVVDERPYVELFLSNHCQFSIRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHEKWLSEKACGFHSTEDEQLKLNSFRGLFLICGITCFLALLIYFLSMVRQFNKKSPQKVGPSNRCSSRSARIQTFLHFVDEKEDVSPKLKRKLDYISSNRLRSISKRVQEDISQEAP* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0009 915 Gene3D - 730 810 - -
Gso14g0009 915 CDD PBP1_GABAb_receptor_plant 32 422 IPR044440 -
Gso14g0009 915 PANTHER GLUTAMATE RECEPTOR 3.6 27 904 - -
Gso14g0009 915 Pfam Ligand-gated ion channel 805 833 IPR001320 GO:0015276|GO:0016020
Gso14g0009 915 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 904 - -
Gso14g0009 915 CDD GluR_Plant 465 803 - -
Gso14g0009 915 PIRSF IGluLR_plant 1 914 IPR017103 -
Gso14g0009 915 Gene3D - 578 712 - -
Gso14g0009 915 SUPERFAMILY Periplasmic binding protein-like II 445 805 - -
Gso14g0009 915 Gene3D - 146 420 - -
Gso14g0009 915 SMART GluR_14 466 805 IPR001320 GO:0015276|GO:0016020
Gso14g0009 915 Gene3D - 453 577 - -
Gso14g0009 915 SUPERFAMILY Periplasmic binding protein-like I 26 459 IPR028082 -
Gso14g0009 915 Gene3D - 49 395 - -
Gso14g0009 915 Pfam Receptor family ligand binding region 49 403 IPR001828 -
Gso14g0009 915 Pfam Bacterial extracellular solute-binding proteins, family 3 485 804 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0009 Gso-Chr14 144380 148175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0009 21 905 Ion Channels AT2G17260 61.735 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0009 K05387 - gmx:100793969 1533.47