Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0006 ATGGGCAACACATGCCGCGGATCTTTGAAAGGGAAATATATTCAGGGCTTCAGCCAGCCCGAAGACCATTCCAAGCGCTCCACCACCCATTCTGATCCCTCCTCAACCAAGCAGCAAGACGACAACGACAACAACAACAACAACAACAACAACAACAATCTTCCCTTCAACGCCAAGAGAGAAGCCATCATGCGCCGAGGCCTCGACAACCAAGCCTATTATGTCCTAGGCCATAAGACTCCCAACATTCGTGATCTATACACTCTTGGTCGTAAATTGGGACAGGGCCAATTTGGCACCACTTATTTATGCACCGAGAATTCTACCTCCATTGAATATGCCTGCAAATCCATCTCCAAAAGGAAGTTGATTTCCAAGGAGGACGTGGAGGACGTTAGGAGGGAAATTCAGATAATGCATCATTTAGCTGGTCACAAGAACATTGTCACCATCAAGGGTGCTTATGAGGATCCTCTCTATGTTCATATTGTCATGGAGCTTTGTTCCGGGGGTGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTATACCGAGAGGAAGGCCGCGGAGTTGACCAAAATTATTGTTGGGGTTGTTGAGGCTTGCCATTCCCTTGGGGTCATGCATAGAGATCTCAAGCCTGAAAACTTTCTCTTGGTCAACAAAGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCTGTATTCTTCAAACCCGGTCAAGTTTTCACTGATGTAGTCGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACAGCTGGTGTCATACTGTACATATTGCTTAGTGGCGTGCCGCCATTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCAGTATTGAAGGGACATATAGATTTTGACTCAGATCCTTGGCCTCTAATATCTGACAGTGGAAAAGATCTGATTAGAAAGATGCTGTGTTCTCAGCCTTCAGAACGGTTGACTGCTCATCAAGTGTTATGTCATCCTTGGATATGTGAGAATGGAGTTGCCCCTGACAGATCACTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTCTGCGAGTGATTGCTGAAAGTCTATCTGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACTGATAACAGTGGTGCAATCACTTTCGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATATCGAAATACGTGATCTTATGGAAGCGGCTGATGTGGACAAAAGTGGAACCATAGATTATGGGGAGTTTATTGCTGCTACATTTCATCTCAACAAACTAGAGCGTGAAGAACATCTTATTGCAGCATTCCAATATTTTGACAAGGATGGTAGTGGCTACATTACAGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACTGATGCTTTTCTTGAAGATATTATTAGAGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGCTGCCATGATGCAAAAAGGCAACGCTGGAATTGGTAGGAGGACTATGCGCAACAGTCTGAATTTAAGCATGAGAGATGCACCAAGTGCTCAATAG 1653 0.4428 MGNTCRGSLKGKYIQGFSQPEDHSKRSTTHSDPSSTKQQDDNDNNNNNNNNNNLPFNAKREAIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSQPSERLTAHQVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDIEIRDLMEAADVDKSGTIDYGEFIAATFHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACAEHNMTDAFLEDIIREVDQDNDGRIDYGEFAAMMQKGNAGIGRRTMRNSLNLSMRDAPSAQ* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0006 550 Gene3D Phosphorylase Kinase; domain 1 89 172 - -
Gso14g0006 550 MobiDBLite consensus disorder prediction 1 57 - -
Gso14g0006 550 SUPERFAMILY EF-hand 369 526 IPR011992 -
Gso14g0006 550 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Gso14g0006 550 ProSitePatterns EF-hand calcium-binding domain. 507 519 IPR018247 -
Gso14g0006 550 CDD STKc_CAMK 87 344 - -
Gso14g0006 550 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Gso14g0006 550 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Gso14g0006 550 ProSiteProfiles EF-hand calcium-binding domain profile. 496 529 IPR002048 GO:0005509
Gso14g0006 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Gso14g0006 550 Pfam EF-hand domain pair 463 524 IPR002048 GO:0005509
Gso14g0006 550 Pfam EF-hand domain pair 393 452 IPR002048 GO:0005509
Gso14g0006 550 ProSiteProfiles Protein kinase domain profile. 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0006 550 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Gso14g0006 550 ProSiteProfiles EF-hand calcium-binding domain profile. 460 495 IPR002048 GO:0005509
Gso14g0006 550 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Gso14g0006 550 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0006 550 Pfam Protein kinase domain 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0006 550 MobiDBLite consensus disorder prediction 31 57 - -
Gso14g0006 550 Gene3D - 355 527 - -
Gso14g0006 550 SMART efh_1 428 456 IPR002048 GO:0005509
Gso14g0006 550 SMART efh_1 498 526 IPR002048 GO:0005509
Gso14g0006 550 SMART efh_1 464 492 IPR002048 GO:0005509
Gso14g0006 550 SMART efh_1 392 420 IPR002048 GO:0005509
Gso14g0006 550 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 42 535 - -
Gso14g0006 550 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
Gso14g0006 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 535 - -
Gso14g0006 550 Gene3D Transferase(Phosphotransferase) domain 1 173 354 - -
Gso14g0006 550 SUPERFAMILY Protein kinase-like (PK-like) 71 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0006 Gso-Chr14 123191 133058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0006 1 546 EF-hand Containing Proteins AT2G17290 84.461 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso14g0006 Pkinase 1.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0006 K13412 - gmx:100778173 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0006 14 123191 133058 Gso2g2650 2 50659889 50666358 GST