Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1607 ATGAGAATGTTGCCTGTTTGCTCAGCCACCCCAAGTTATTCCACATCTTCCCAGATTCCCTTGTTTGGGGGATTGCACCCAATTCGAAAGGATCTTGAGAGCAGATGTGTGGCTGAAGAAGGTGTGCATTTGGCTTCACAATATGGAGCTCATTCACTGAGAAATTCATTTGCAGTGCAAGCTACAAAGACAGTATTGGGCAGTTTTTCTTCTACAAGTGAATCAGGATACCTTACAAGCACGTGGGGTTATTCACCAGTGCTGACAGATGGACATCATTCACTGAGTAACGGGGAAGTCAGACACACGGAAAGTTATCATTTATCTACTGTGCCAGATGAACTTGCGGACTTCGCAGAACAGGCAACTGAAGGATCTAACACATTAGTGACACCAGCACAACCAGAAACACTATCGGCTGCAGATATAATGCCTGAGAACTTTACATCAAGTCCTAGTTCTATTAATGTGGACAATGAATCATTAGCCAGTACAAAAGCAAGTGTTGGAGACCTTGTTGCTGGATTCAATGAATCATTCAATGCCTCAATCAATGAGGGACAAAATGCTTTACGAAGCTCACTGGATACAGCCACTTCTTTTGTAGATTCTATTGTTAAAACTGCTACTGAATCTGTAGATAATACTTTTAGCAAGGCATTTTCTTCTGTTGATCAAACAGGGGAGTTAGCAAATAAAAAATTAACCAGCTTTTCAAGTGAGCTGACTGGAGTCACAAATAAAGCACCTGCCGTGGCTATTGATGTGTTGCGCCGCACAATTGTAGTTGTAGAGAGTTCTCTAACAAGGGGGGCTTCCTATGTTGTCTACTTATATGGCTCAGCCAAGGAGCTCCTTCCCGCAGGAATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCTGTTGGGTCAGCAACTCAAAGGATATACATGGCTGTCTATTCATTGGAGAAGAGTCTTGGCTTGGATCCAAATGACCCAATCATTCCATTTGTTGTTCTTGTAGGCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATATGGAGGTTACTCAGGAAATTTGTCCCCTAAATCAGCTTTCGAGCTTTTGGCTGAGGACGCAAATGCTGCACTTATTGATGTCCGCTCTGAGGAAATGCGAGAAAAAGATGGAATTCCTGATCTCCGACGGGCTGCTAGGTTTCGTTATGCAAGTATAATTCCTCTTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGAGTGGTAGAGAGCTTGATGATTCCTTGATTGCAGCTATTATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTTGTTCTAAAGGCATTGCAAGATCCTTGAGAAAAATTGGGGTCAAGAATCCATACTTGGTTGAAGGAGGCTTTTATTCTTGGATGAAACAAGGTCTCCGTATCAAGGAACTCAAACCTGAGACAGCACTTTCCATCCTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTTGGCAACTTTTAGGTTATGGTACAGTACTTATTGCAGGGCTGTATGCATTATTAGAGTTGGAGAAGACATTACAGTTAATTGGTGCATTTGGCCTCGGTTTGACCATCTATTTGCGGGTTTCTTCATATGAAAACTCAGAAGATCTAAAACAAGATGTGAGGTTGTTGCTTTCTCCTGTTAGACTTGGAGCACAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCAAATGGATTAGGATTACCTACATCACCTTCATCATCAGATGTTCAGAACCGGGTATTGCAGGCTGCTGCCAAACATGAATCCCAACCATCTGATAGTGAAGGTAACCAAGATCCAGTTCCTGAACCGACAGTTCCTCTCAATCAGAATGTATGA 1932 0.4239 MRMLPVCSATPSYSTSSQIPLFGGLHPIRKDLESRCVAEEGVHLASQYGAHSLRNSFAVQATKTVLGSFSSTSESGYLTSTWGYSPVLTDGHHSLSNGEVRHTESYHLSTVPDELADFAEQATEGSNTLVTPAQPETLSAADIMPENFTSSPSSINVDNESLASTKASVGDLVAGFNESFNASINEGQNALRSSLDTATSFVDSIVKTATESVDNTFSKAFSSVDQTGELANKKLTSFSSELTGVTNKAPAVAIDVLRRTIVVVESSLTRGASYVVYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQRIYMAVYSLEKSLGLDPNDPIIPFVVLVGSSATLWAFYWLWTYGGYSGNLSPKSAFELLAEDANAALIDVRSEEMREKDGIPDLRRAARFRYASIIPLEVDGSIRKLLKSGRELDDSLIAAIIRNLKIVKDSSRVIVLDADGTCSKGIARSLRKIGVKNPYLVEGGFYSWMKQGLRIKELKPETALSILNEEAEAILEDVSPSPWQLLGYGTVLIAGLYALLELEKTLQLIGAFGLGLTIYLRVSSYENSEDLKQDVRLLLSPVRLGAQAFSWAAGKLESNGLGLPTSPSSSDVQNRVLQAAAKHESQPSDSEGNQDPVPEPTVPLNQNV* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1607 643 Pfam Rhodanese-like domain 370 485 IPR001763 -
Gso13g1607 643 Gene3D - 359 513 IPR036873 -
Gso13g1607 643 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 347 490 IPR036873 -
Gso13g1607 643 SMART rhod_4 364 489 IPR001763 -
Gso13g1607 643 CDD RHOD 369 483 - -
Gso13g1607 643 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 642 - -
Gso13g1607 643 ProSiteProfiles Rhodanese domain profile. 374 492 IPR001763 -
Gso13g1607 643 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 642 IPR044690 GO:0009704|GO:0071277|GO:0090333
Gso13g1607 643 MobiDBLite consensus disorder prediction 597 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1607 Gso-Chr13 31301168 31309348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1607 336 453 Sulfurtransferasese or Rhodanese AT5G23060 29.365 8.32e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1607 - - gmx:100786142 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0015 18 161962 170213 Gso13g1607 13 31301168 31309348 GST