Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1605 ATGGCCTTCTGTAATAAGGTTGGAAATGTCTTGAGGCAGGGTGCTGCTCGCAGCACACAAGCACCTGTTTCATCCATGCTTAATTACATTCGCTGCATGTCTTCAAGCAAGCTTTTTATTGGAGGCCTTTCATATGGAGTTGACGATCAGTCTCTTAAGGATGCATTTTCTGGCTTTGGAGATGTGGTTGATGCAAAAGTTATAACTGACAGAGACTCTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCTCCAATGATGAGTCTGCAAGTTCGGCACTCTCTGCAATGGATGGGAAGATGGGCGAAGCATTAGGGTATCCTATGCAAATGATAGACCTTCTGGACCTCAATCTGGCGGCGGCGGCGGTGGTGGTTATCGCAGTGGGGGTTTTGGCGGCGGGTGGTGATTTTGCTTCTCGCAATGGTGGTTGGTGA 438 0.4795 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKMGEALGYPMQMIDLLDLNLAAAAVVVIAVGVLAAGGDFASRNGGW* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1605 145 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL 1 100 - -
Gso13g1605 145 SUPERFAMILY RNA-binding domain, RBD 30 101 IPR035979 GO:0003676
Gso13g1605 145 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 105 IPR000504 GO:0003723
Gso13g1605 145 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 100 - -
Gso13g1605 145 SMART rrm1_1 37 112 IPR000504 GO:0003723
Gso13g1605 145 Gene3D - 11 110 IPR012677 -
Gso13g1605 145 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1605 Gso-Chr13 31290879 31292870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1605 38 99 Eukaryotic Initiation Factors Gene Family AT1G22760 40.323 4.99e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1605 - - gmx:100499841 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0017 18 179340 181437 Gso13g1605 13 31290879 31292870 GST