Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1597 ATGGCTACCTCCAAATTAAAACCCAAAACCCTACTTTCTCCTTCTAAGCTCTTTCTTCTCTCGCTGTGTCTCGCGTGCACCGCCATTGCCGACGATGGCGAGTTCATGTCCAAGCTCGCCAAGGCGCTGAGCCCGACGCCTTCTGGTTGGTCTGGGAGCAGCTTCTGCGCCTGGAATGGCGTCAAGTGCAGCGCCAACCGAGTGACCTCAATCAACATCGCTTCGCAGTCCCTCGGCGGAATGCTTCCTCCGGATCTCAACTCACTCTCCCAACTCACCTCGCTCTCTCTCCAGAACAACGCGCTCTCCGGCGCGTTTCCTTCACTCGCCAACCTCTCCATGCTCGAAAGCGTTTTCCTTAGCAGCAACAACTTCACCTCCATCCCCGTTGGTTGCTTCCAGGGACTCCCCAGTTTGCAAACCCTCAGCATGACCGATAGCATCAACCTCGCTCCATGGACGATTCCCGCCGAGTTGACTGATAGCATCAACCTCGTCAAACTCGAACTCGGAAACGCAAACCTCATCGGTACCTTGCCTGATGTATTCGACAAGTTTGTGAGTTTGGTGGAGCTTCGTCTCTCTTACAACAACCTCACCGGTGTCTTACCCAAATCCTTCGCTGGATCTGCGATTCAGAATATGTGGCTCAACAATCAGAACGGCTTCGGGTTTTCGGGTACCATTGAGGTGCTTGCTTCCATGACCCACTTGTCTCAAGTCTGGCTTCAGAAGAACCAGTTCACGGGTCCCATTCCGGATTTGTCAAATTGCACCACTTTGTTTGATCTGCAGCTGAGAGACAACCAGTTAACCGGTGTGGTTCCACCTTCTCTCATGTCCCTTTCTGGCTTGCAGAACGTTACTTTAGCCAACAATGCGCTTCAGGGTCCCGTTCCTTCGTTTGGGAAAGGTGTGAAGTTCACTCTCGATGGGATCAATAGTTTTTGTTTGAAAGATGTTGGACCCTGCGATTCTCGCGTCACCACTTTGCTTGATATTGCTGCGGGTTTCGGGTATCCCTTTCAGTTGGCGCGTTCCTGGACTGGGAACGATCCTTGTGATGATTGGAGTTTTGTTGTGTGTGCAGGGGGGAAGATTATTACGGTGAATTTGGCAAAGCAGAATTTGACTGGAACCATTTCACCTGCGTTTGCTAATTTAACTGATTTGAGGAACTTGTTTCTCAATGATAACAATTTGGGTGGTTCAATACCGGGGAGTTTGACAAATTTGGCTCAGCTTGAGGTTCTGAATGTGTCTAATAACAAGCTATCTGGCGATGTTCCCAAGTTCTCAAGCAAGGTGAAATTCACGACTGCAGGTAATGATTTACTTGGGCGTTCTGATGGTGGTGGTGGCAGTGGAACTACTCCGTCCAAGGGTTCCGGTGATGCACCGAGTGGAAGTCCGAGTGCAGGGACAAGTGGATCTTCACTTTCACCTGCTTGGATCGCAGGTATTGTTGTTATTGCTGTGTTTTTTGTTGCAGTCGTGGTGTTTGTGTTTTGCAAGTGTCATGCTAAAAACCGGCATGGGAAGTTTGGAAGGGTTAATAATCCGGAAAATGGGAAAGGAGAGGTTAAGATTGATATGATGAGCGTTACCAATTCCAATGGATATGGTGGTGTTCCGAGTGAGTTGCAGAGCCAGGGCAGTGAGCGTAGTGACCTTCATGTTTTTGAGGGTGGGAATGCTACTATTTCAATCCAGGTTCTTCGACAAGTAACTGATAATTTCAGTGAGAAGAACATTTTGGGTAGGGGAGGATTTGGGGTTGTTTATAAAGGGGAATTGCATGATGGAACACAAATTGCCGTGAAGAGAATGGAATCTGTTGCAACGGGGAGTAAGGGATTGAATGAGTTCCAAGCAGAGATTGCAGTTCTAAGTAAAGTCAGGCACAGGCATTTGGTGGCTCTTTTAGGGTATTGCATTAACGGCAACGAAAGACTTTTGGTGTACGAGTATATGCCTCAAGGGACATTAACGCAACACCTGTTTGATTGGGGTGAAAATGGTTGTGCTCCTTTGACTTGGAAACAAAGGGTAGCAATAGCTTTGGATGTAGCTCGGGGAGTGGAATACTTGCACAGCTTGGCTCAGCAAAGCTTCATTCACAGGGACTTAAAGCCCTCAAACATATTGCTGGGTGATGACATGAGAGCCAAGGTTGCAGATTTTGGCTTGGTTAAAAATGCGCCAGATGGGAAATATTCTGTTGAGACACGCTTGGCTGGAACATTTGGATATCTAGCACCGGAATATGCAGCTACCGGAAGAGTGACGACCAAAGTAGACGTGTACGCATTTGGAGTAGTTTTGATGGAACTGATTACTGGTAGAAGGGCATTGGATGATACTGTGCCTGATGAAAGATCTCACTTGGTTTCCTGGTTCCGTAGGGTACTAATTAACAAGGAGAACATCCCAAAGGCAATTGATCAAACTCTCGATCCCGATGAGGAAACCATGGAGAGCATATATAAAGTGGCTGAGCTAGCTGGCCATTGCACTGCTCGTGAACCATACCAAAGGCCTGATATGGGGCATGCAGTGAATGTCCTGGGTCCTCTGGTAGAGCAATGGAAGCCCACCACCCATGAAGAAGAAGAAGGTTATGGCATTGACCTTCACATGAGCCTTCCTCAAGCTCTGCGAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTGACATGTCCATCTCACAAACTCAATCAAGCATTCCTGCAAAACCTTCAGGATTTACAGACTCCTTTGATTCAATGGATTGCCGCTGA 2784 0.4792 MATSKLKPKTLLSPSKLFLLSLCLACTAIADDGEFMSKLAKALSPTPSGWSGSSFCAWNGVKCSANRVTSINIASQSLGGMLPPDLNSLSQLTSLSLQNNALSGAFPSLANLSMLESVFLSSNNFTSIPVGCFQGLPSLQTLSMTDSINLAPWTIPAELTDSINLVKLELGNANLIGTLPDVFDKFVSLVELRLSYNNLTGVLPKSFAGSAIQNMWLNNQNGFGFSGTIEVLASMTHLSQVWLQKNQFTGPIPDLSNCTTLFDLQLRDNQLTGVVPPSLMSLSGLQNVTLANNALQGPVPSFGKGVKFTLDGINSFCLKDVGPCDSRVTTLLDIAAGFGYPFQLARSWTGNDPCDDWSFVVCAGGKIITVNLAKQNLTGTISPAFANLTDLRNLFLNDNNLGGSIPGSLTNLAQLEVLNVSNNKLSGDVPKFSSKVKFTTAGNDLLGRSDGGGGSGTTPSKGSGDAPSGSPSAGTSGSSLSPAWIAGIVVIAVFFVAVVVFVFCKCHAKNRHGKFGRVNNPENGKGEVKIDMMSVTNSNGYGGVPSELQSQGSERSDLHVFEGGNATISIQVLRQVTDNFSEKNILGRGGFGVVYKGELHDGTQIAVKRMESVATGSKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFDWGENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLGPLVEQWKPTTHEEEEGYGIDLHMSLPQALRRWQANEGTSTMFDMSISQTQSSIPAKPSGFTDSFDSMDCR* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1597 927 MobiDBLite consensus disorder prediction 453 476 - -
Gso13g1597 927 Gene3D Transferase(Phosphotransferase) domain 1 658 879 - -
Gso13g1597 927 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 21 927 - -
Gso13g1597 927 MobiDBLite consensus disorder prediction 443 476 - -
Gso13g1597 927 Gene3D Ribonuclease Inhibitor 325 450 IPR032675 -
Gso13g1597 927 CDD STKc_IRAK 586 859 - -
Gso13g1597 927 SUPERFAMILY Protein kinase-like (PK-like) 558 856 IPR011009 -
Gso13g1597 927 Pfam Leucine rich repeat 90 145 IPR001611 GO:0005515
Gso13g1597 927 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Gso13g1597 927 Pfam Leucine rich repeat N-terminal domain 328 362 IPR013210 -
Gso13g1597 927 SMART LRR_typ_2 112 135 IPR003591 -
Gso13g1597 927 SMART LRR_typ_2 89 108 IPR003591 -
Gso13g1597 927 SMART LRR_typ_2 412 434 IPR003591 -
Gso13g1597 927 SMART LRR_typ_2 186 209 IPR003591 -
Gso13g1597 927 SMART LRR_typ_2 388 411 IPR003591 -
Gso13g1597 927 Gene3D Ribonuclease Inhibitor 34 321 IPR032675 -
Gso13g1597 927 SUPERFAMILY L domain-like 39 434 - -
Gso13g1597 927 Pfam Protein tyrosine and serine/threonine kinase 583 854 IPR001245 GO:0004672|GO:0006468
Gso13g1597 927 ProSiteProfiles Protein kinase domain profile. 580 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1597 927 MobiDBLite consensus disorder prediction 906 927 - -
Gso13g1597 927 ProSitePatterns Protein kinases ATP-binding region signature. 586 608 IPR017441 GO:0005524
Gso13g1597 927 PANTHER OSJNBA0070M12.3 PROTEIN 21 927 - -
Gso13g1597 927 Gene3D Phosphorylase Kinase; domain 1 544 657 - -
Gso13g1597 927 SMART serkin_6 580 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1597 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1597 Gso-Chr13 31217779 31222033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1597 68 861 Receptor kinase-like Gene Family AT5G07280 32.285 1.34e-92 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gso13g1597 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1597 - - gmx:100783655 1708.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0025 18 262968 267077 Gso13g1597 13 31217779 31222033 GST