Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1561 ATGATTCCAACACTTGTTTGTATTGGCACAACAATATTCCAAAGCACCCTCTCTTCTTACTCATTGTCTTTCATCTCTCTTTTTCTCTCCACGTCACTCGCCCTTCTTGCTATTTCCCTCAACTATTGGCTTGTCCCCGGAGGTTTTGCATGGAGGAAATATCACAGTCGTTACAAAGGCCATGCAAAACTCTCTGGCCCAATGGGCTGGCCCATATTGGGAACTTTACCTGCGATGGGCCCTCTAGCCCACAGGAAACTTGCTGCCATGGCCACTTCACCAAAAGCAAAAAAGCTCATGACATTGAGTCTAGGAACAAATCCAGTTGTTATCAGCAGTCACCCAGAAACCGCAAGAGAAATTCTTTGTGGGTCGAACTTCGCTGACCGACCCGTTAAAGAATCGGCCCGAATGCTCATGTTTGAGCGTGCCATTGGATTTGCTCCATATGGGACTTATTGGCGCCACCTACGTAAAGTGGCAATCACCCACATGTTCTCTCCGAGGAGGATTTCTGACTTGGAGAGTCTCCGACAACATGTGGTTGGCGAAATGGTGATGAGGATATGGAAGGAGATGGGGGACAAAGGGGTGGTAGAGGTTCGAGGCATATTGTATGAAGGGTCTTTGAGCCACATGTTGGAGAGTGTGTTTGGTATTAATAATTCTCTAGGATCACAAACAAAGGAGGCGTTGGGTGATATGGTTGAGGAAGGGTATGACTTGATTGCCAAGTTTAATTGGGCAGACTATTTTCCTTTCGGGTTTTTGGACTTTCACGGGGTCAAGAGAAGGTGTCACAAATTGGCAACTAAGGTCAATAGTGTGGTGGGTAAAATTGTGGAAGAAAGAAAAAATTCAGGGAAGTACGTTGGACAAAATGATTTTCTTAGTGCCTTGTTATTGTTGCCTAAAGAGGAAAGCATAGGTGATTCAGATGTAGTGGCTATCTTATGGGAAATGATATTTCGGGGAACAGACACAATTGCTATACTTTTAGAATGGATCATGGCCATGATGGTTTTACACCAAGACGTACAAATGAAAGCACGTCAAGAGATCGACTCATGCATCAAGCAAAACGGTTACATGCGAGACTCAGACATTCCAAACCTCCCTTACCTCCAGGCCATAGTGAAGGAGGTTCTCCGATTGCACCCACCAGGCCCATTACTTTCCTGGGCTCGCCTCGCAATCCATGATGTCCACGTGGACAAGGTCATCGTGCCAGCTGGCACAACTGCAATGGTTAACATGTGGGCTATATCACATGACTCATCCATTTGGGAGGACCCGTGGGCCTTTAAGCCCGAAAGATTCATGAAAGAAGATGTGTCGATCATGGGGTCGGACATGAGACTTGCACCATTTGGTGCAGGACGTAGGGTGTGCCCAGGAAAAACATTAGGCTTAGCCACAGTTCATCTATGGCTTGCACAACTTCTTCACCATTTCATATGGATTCCAGTGCAACCCGTGGATCTTTCAGAATGCCTAAAGCTCTCGCTCGAAATGAAAAAGCCTTTACGATGCCAAGTGATTCGCAGGTTCAACACCATAAGCTCTTGA 1569 0.4621 MIPTLVCIGTTIFQSTLSSYSLSFISLFLSTSLALLAISLNYWLVPGGFAWRKYHSRYKGHAKLSGPMGWPILGTLPAMGPLAHRKLAAMATSPKAKKLMTLSLGTNPVVISSHPETAREILCGSNFADRPVKESARMLMFERAIGFAPYGTYWRHLRKVAITHMFSPRRISDLESLRQHVVGEMVMRIWKEMGDKGVVEVRGILYEGSLSHMLESVFGINNSLGSQTKEALGDMVEEGYDLIAKFNWADYFPFGFLDFHGVKRRCHKLATKVNSVVGKIVEERKNSGKYVGQNDFLSALLLLPKEESIGDSDVVAILWEMIFRGTDTIAILLEWIMAMMVLHQDVQMKARQEIDSCIKQNGYMRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVIVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFMKEDVSIMGSDMRLAPFGAGRRVCPGKTLGLATVHLWLAQLLHHFIWIPVQPVDLSECLKLSLEMKKPLRCQVIRRFNTISS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1561 522 SUPERFAMILY Cytochrome P450 66 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PANTHER CYTOCHROME P450 78A7-RELATED 10 516 - -
Gso13g1561 522 Pfam Cytochrome P450 66 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 Gene3D Cytochrome P450 51 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 10 516 - -
Gso13g1561 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Gso13g1561 522 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1561 522 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1561 Gso-Chr13 30953091 30955339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1561 17 516 Cytochrome P450 AT1G13710 52.353 4.83e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1561 - - gmx:100799715 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g1561 13 30953091 30955339 Gso5g1250 5 36045880 36048501 PCT
Gso13g1561 13 30953091 30955339 Gso8g0866 8 8040283 8042670 PCT
Gso5g1250 5 36045880 36048501 Gso13g1561 13 30953091 30955339 PCT
Gso8g0866 8 8040283 8042670 Gso13g1561 13 30953091 30955339 PCT