Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1526 ATGGGTTTATGTTCTCTTTTTTTGGTTACACTTCTTCTGCTAACATCATTTGCGGTATGCCAACTTGAAGAATTTATCAGCATTGACTGTGGAGGGACAAGTAACTACACCGATAAAAGCACAGGGCTTGCATGGATATCAGACTCTGGGATCATGAAACATGGCAAGCCAGTGGAGGTACAAAATCCAAGTGGAAACAAGTTTCAGTATCAGAGACGCCGAGAGTTTCCTATAGACAGCAGAAAATACTGCTATACACTTGTCACTGAGGAGAGAAGAAGGTATCTGGTGCGAGCAACGTTTAAATATGGTAACTTGGATGATGGAGACACATACCCTCAGTTTCAGCTCTATTTGGATGCAACCAAATGGGCTACTGTGTCAATCTATGATGCCTCAAGAATCTATGCGAAGGAAATGATCTTCAGGGCACCCTCAAACTCTATTGATGTTTGCATGTGTTGTGCTACCACTGGTTCTCCCTTCATATCTACCCTCGAGCTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAAGGCAGTTTTTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGTTGTCAGGTATCCAGATGACCCATATGATAGAATTTGGGAGTCTGATCTTATTAAAAGACAAAATTATCTTGTTGGGGTGGCCCCAGGCACTGAAAGAATTAACACAACAAAGAAAATAGAAATAGAGACAAGAGAAAACCCACCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACCAAAGGAATACTTAGCTATAGACTAAACCTGGAAGACTTCCCTGGCAATGCTAGAGCTTACGCATATTTCGCGGAGATTGAAGATCTGCCTAAGAATGAGACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGAGCTACACTCTCTATGAACCAAGTTACATGAATGTGAGTCTGGAGTTTGTGCTTTCGTTCTCCTTTGTTAAGACCCGGGATTCCACTCAAGGACCTCTTCTAAATGCAATGGAAATTAGCAAATACATGCCGATTGCTTCAAAGACTGACAGGCAAGACTCAAATTTTGTAAATGCATTTCGTTTCTTATCTGCTGAAAGTGTCCTGAAGAATGAAGGTGATCCCTGTGTTCCAACTCCCTGGGAGTGGGTAAATTGTAGCACAACTACACCTCCAAGAATTACAAAGATAAACCTGTCAAGAAGGAATCTCAAGGGTGAAATCCCAGGGAAGCTCAACAACATGGAAGCATTGACAGAACTGTGGTTAGATGGCAACATGCTCACCGGACAACTTCCTGACATGAGCAATCTTATCAATGTAAAGATTATGCATCTAGAGAACAACAAATTGACTGGTCCATTGCCATCTTACTTGGGTAGCTTGCCAAGTTTACAAGCACTGTTCATACAGAATAACTCATTTAGTGGGGTAATACCATCAGGATTACTGTCTGGAAAAATCATTTTCAACTTTGATGATAATCCTGAACTACATAAAGGGAACAAGAAGCATTTTCAATTGATGCTAGGAATTTCTATTGGAGTACTAGTGATTCTATTAATATTGTTCTTAACAAGTTTGGTGCTATTGCTTATTCTGCGGAGAAAGACATCTCAACAGAAACGTGACGAAAAGGGTGTTTCTGGACGCAGCAGCACTAAACCTTTAACTGGATACTCATTTGGTCGGGATGGGAATATAATGGATGAAGGTACTGCTTACTATATTACACTCTCAGAGCTGAAAGAAGCTACTAATAATTTTTCAAAGAATATTGGCAAGGGAAGCTTTGGATCTGTTTACTATGGGAAAATGAAAGACGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCTATGGGAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTAGTTTATGAATATATGCACAATGGCACTTTAAGGGAGTACATTCATGAATGTTCGAGTCAGAAGCAATTAGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGTAATCCTAGTATCATTCACCGCGATGTGAAGACAAGCAATATTCTTCTTGACATCAATATGAGAGCAAAAGTGTCTGACTTTGGACTCTCAAGGCTAGCTGAAGAAGATTTAACTCACATATCAAGTGTTGCAAGGGGAACTGTAGGTTACCTGGATCCTGAGTACTATGCAAATCAACAATTGACTGAAAAGAGTGACGTGTACAGTTTTGGAGTTGTTCTGCTGGAATTGCTATCAGGAAAAAAGGCTGTATCATCAGAAGACTATGGTCCTGAAATGAATATCGTTCACTGGGCTAGATCTTTAATTCGTAAAGGAGATGTGATAAGCATCATGGATCCTTCCCTTGTGGGGAATCTGAAAACTGAGTCAGTTTGGAGGGTTGCAGAAATTGCCATGCAATGTGTAGAACAACATGGTGCATGCAGGCCAAGGATGCAAGAGGTAATTTTGGCTATACAAGATGCTTCTAACATTGAAAAGGGGACAGAAAGTCAACTGAAGCTATCTTCTTCAGGTGGTAATTCAAAGCCACAGTCTTCACGTAAGACTTTACTTGCAAGCTTTCTTGAAATTGAGAGCCCTGACTTGTCAAATAGTTGCCTCCCCTCAGCCAGATAA 2793 0.406 MGLCSLFLVTLLLLTSFAVCQLEEFISIDCGGTSNYTDKSTGLAWISDSGIMKHGKPVEVQNPSGNKFQYQRRREFPIDSRKYCYTLVTEERRRYLVRATFKYGNLDDGDTYPQFQLYLDATKWATVSIYDASRIYAKEMIFRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEGSFFLKVAARINFGAPSEDVVRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKKIEIETRENPPVKVMQTAVVGTKGILSYRLNLEDFPGNARAYAYFAEIEDLPKNETRKFKLEQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVKTRDSTQGPLLNAMEISKYMPIASKTDRQDSNFVNAFRFLSAESVLKNEGDPCVPTPWEWVNCSTTTPPRITKINLSRRNLKGEIPGKLNNMEALTELWLDGNMLTGQLPDMSNLINVKIMHLENNKLTGPLPSYLGSLPSLQALFIQNNSFSGVIPSGLLSGKIIFNFDDNPELHKGNKKHFQLMLGISIGVLVILLILFLTSLVLLLILRRKTSQQKRDEKGVSGRSSTKPLTGYSFGRDGNIMDEGTAYYITLSELKEATNNFSKNIGKGSFGSVYYGKMKDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELLSGKKAVSSEDYGPEMNIVHWARSLIRKGDVISIMDPSLVGNLKTESVWRVAEIAMQCVEQHGACRPRMQEVILAIQDASNIEKGTESQLKLSSSGGNSKPQSSRKTLLASFLEIESPDLSNSCLPSAR* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1526 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Gso13g1526 930 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Gso13g1526 930 PANTHER - 12 892 - -
Gso13g1526 930 SUPERFAMILY Protein kinase-like (PK-like) 592 874 IPR011009 -
Gso13g1526 930 PANTHER OS07G0107800 PROTEIN-RELATED 12 892 - -
Gso13g1526 930 SUPERFAMILY L domain-like 398 518 - -
Gso13g1526 930 Gene3D Phosphorylase Kinase; domain 1 585 682 - -
Gso13g1526 930 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1526 930 ProSiteProfiles Protein kinase domain profile. 607 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1526 930 Pfam Malectin-like domain 28 361 IPR024788 -
Gso13g1526 930 Gene3D Transferase(Phosphotransferase) domain 1 683 897 - -
Gso13g1526 930 Gene3D Ribonuclease Inhibitor 372 522 IPR032675 -
Gso13g1526 930 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1526 Gso-Chr13 30691847 30697736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1526 1 930 Receptor kinase-like Gene Family AT1G67720 69.700 0.0 1310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso13g1526 Malectin_like 4.3e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1526 - - gmx:100798488 1788.85