Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1518 ATGGCAGCTCTGTTACCTTGCGCGCCGAACATAGTCTATGGTCCGTTGTTGGGGAACCGGAGCACGAGCCACCTCCCGCACCGACCTCACTCCCATGCTTTCTCCGGTTCGACCACCAGACACTTTCTTCGCGGTTCGCTTACCGTCGCCCGGTTCGGATTCAAACCCGATTTCTTGCCCGAGCCGGATGAAGCTGAAGGCGTTCTCAGAGAACTGTTCGGCCGAGCGGAGGGACTTCTTTACACGATTGCCGATGCCGCCGTTTCTTCGTCTTCTTCTTCTTCTTCCGATACGGTTGCGGCTTCCTATGCCGCCAAACAGAGCAACGATTGGCTTTCCGGAATTGCCAATTACATGGAGACGGTTCTCAAGGTACTCAAGGACGGGCTTTCTGCTTTGCATGTCCCGTATGCTTATGGTTTTGCAATTATACTGCTCACGGTTCTTGTAAAAGCTGCCACTTTTCCATTAACCAAAAAACAGGTAGAATCTTCCTTAGCTATGCGAACTTTGCAACCACAAGTAAAGGCCATCCAGCAGCGTTATGCTGGTGATCAGGAGAGAATTCAACTCGAAACTGCTCGGTTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTACACTCGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAGTGTGGCAGATGAGGGGCTCCTTACTGAAGGCTTCTTCTGGATACCTTCCCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAGAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTCGTGGATGGTCACCCTCCCCTCGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCTGTGTTGCTGGTCGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGCCTTGACCAATTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCTAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATGAAGAATGACCTAACACAGGTTCAGAAGTCAATGTCTAAACTAAATTCCACAACAGCGGAAGAAGCCAGACTAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGAAAGATTTAAGCTAATAAAAGAGCAAGAGGCAAGAAGAAAACAACAAAGAGAAGAAGAAGAAGAAAAAAGGAAAGCCTTGGAAGCAGCAGCTAGAGAAACTAAAGTAGACAAGACACTTGAGGAAACAGTTGAAGTGGAGAATCAAACTGGAGGTGATTTAGTTGTTGAAAAATCTCGGTCTTTGGCTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAATCCATTAAGTAAAGACTTGGAGGGAAATCAGAATTCTACATCTACATCTGAGACAGAAAATAATGAAGGTTCTGCTCATTTCAACAATGTTGAGATAAACGAGAAAATTTTAGACAAGGAACCAAGAGAAGTATTAACAACTACAACCACCACAAACAAACAACCTCCTGCGGAAGAGACAAAGGATTGA 1632 0.4547 MAALLPCAPNIVYGPLLGNRSTSHLPHRPHSHAFSGSTTRHFLRGSLTVARFGFKPDFLPEPDEAEGVLRELFGRAEGLLYTIADAAVSSSSSSSSDTVAASYAAKQSNDWLSGIANYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQVKAIQQRYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSSVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVQKSMSKLNSTTAEEARLSEKTSEGPQPGERFKLIKEQEARRKQQREEEEEKRKALEAAARETKVDKTLEETVEVENQTGGDLVVEKSRSLASDTDPSISGVVNGNPLSKDLEGNQNSTSTSETENNEGSAHFNNVEINEKILDKEPREVLTTTTTTNKQPPAEETKD* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1518 543 MobiDBLite consensus disorder prediction 466 509 - -
Gso13g1518 543 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 139 353 IPR028055 -
Gso13g1518 543 MobiDBLite consensus disorder prediction 392 448 - -
Gso13g1518 543 MobiDBLite consensus disorder prediction 380 543 - -
Gso13g1518 543 Pfam 60Kd inner membrane protein 139 353 IPR001708 GO:0016021|GO:0032977
Gso13g1518 543 PANTHER OXA1 30 477 IPR001708 GO:0016021|GO:0032977
Gso13g1518 543 PANTHER BNAA09G28180D PROTEIN 30 477 - -
Gso13g1518 543 Coils Coil 409 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1518 Gso-Chr13 30643231 30649370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1518 18 421 Chloroplast and Mitochondria Gene Families AT2G28800 51.358 2.44e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1518 K03217 - gmx:100815190 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0105 18 849932 855567 Gso13g1518 13 30643231 30649370 GST