Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1509 ATGGGAAGCAAAGGTGGATTTTTCCGTTATGCAGATGGTTTTGACAAATTGCTATTACTCTTTGGGACTTTGGGTTGCATTGGAGGTGGCCTACAAACCCCTATGACAATGCTTGCTCTTGGCAGTTTGATAAATGATTATGCTGGTGGATCTGTCCAAACCATGAAAAGTGAGATTGAACCGGAAGATCCTAGACATAGAAAGTTCAAAAATTCTATGAAGGGCCATATAAAACTGAGAGATGTCTTTTTCTCATACCCAGCAAGGCCAGACCAAATGATTCTCAAGGGCCTCAGTCTTGATATTGAAGCTGGCAAAACAGTTGCATTAGTGGGACAAAGCGACAAATGTGACATCAGAAAATTTAACTTGAGAAGTTTGAGATCACATATTGCCTTGGTGAGTCAGGAGCCAACCCTCTTTGCAGGAACTATACGTGACAACATTATGTATGGTAAAAAGGATGTATCAGAAGATGAAATAAGGAAGGCAGCACGTCTTTCAAATGTTCATGAGTTTATAAGTTCGATGAAAGATGTTTATGACACTTACTGTGGAGAAAGAGGAGTGCAGCTGTCAGGAGGGCAAAAGCAAAGGATAGCAATTGCTAGAGCAGTGCTTAAGGACCCTTCAATCCTTCTGTTAGATGAGGCAACAAGTGCTCTTGACAGTGTGTCAGAGAATCTGGTACAAGAGGCACTCGAGAAAATGATGGTTGGAAGAATGTGTGTAGTTATAGCTCACCGTTTGTCGACAATACAAAGTGTAGATTCCATAGTTGTGATTAAAAATGGGAAGGTGGTGGAACAAGGATCACACTCCTAG 825 0.4133 MGSKGGFFRYADGFDKLLLLFGTLGCIGGGLQTPMTMLALGSLINDYAGGSVQTMKSEIEPEDPRHRKFKNSMKGHIKLRDVFFSYPARPDQMILKGLSLDIEAGKTVALVGQSDKCDIRKFNLRSLRSHIALVSQEPTLFAGTIRDNIMYGKKDVSEDEIRKAARLSNVHEFISSMKDVYDTYCGERGVQLSGGQKQRIAIARAVLKDPSILLLDEATSALDSVSENLVQEALEKMMVGRMCVVIAHRLSTIQSVDSIVVIKNGKVVEQGSHS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1509 274 PANTHER OS04G0481700 PROTEIN 55 274 - -
Gso13g1509 274 PANTHER OS04G0481700 PROTEIN 11 50 - -
Gso13g1509 274 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524
Gso13g1509 274 Gene3D ABC transporter type 1, transmembrane domain 55 65 IPR036640 GO:0005524|GO:0016021
Gso13g1509 274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 274 IPR003439 GO:0005524
Gso13g1509 274 Pfam ABC transporter 116 220 IPR003439 GO:0005524
Gso13g1509 274 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 11 50 IPR039421 -
Gso13g1509 274 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 55 274 IPR039421 -
Gso13g1509 274 Gene3D - 66 114 IPR027417 -
Gso13g1509 274 Gene3D - 115 274 IPR027417 -
Gso13g1509 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1509 Gso-Chr13 30559060 30561623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1509 56 274 Calmodulin-binding Proteins AT2G36910 51.440 1.35e-73 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1509 K05658 - gsj:114381777 536.569