Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1473 ATGTGCGGAATCCTCGCAGTGTTGGGTTGCGTCGACAACTCTCAGGCCAAGCGCGCTCGCATCATCGAATTGTCTCGCAGGTTGCGGCATAGAGGTCCTGATTGGAGTGGCATAGATTGCTATGAGGATTGTTACCTAGCTCATCAACGCCTTGCTATTGTTGACCCTACTTCAGGGGACCAACCTTTGTACAACGAAGATAAGACTATTGTTGTCACTGTAAATGGGGAGATATACAATCACAAGCAATTGAGACAGAAACTGAGTTCCCATCAATTTCGAACTGGTAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAATATGGAGAAGAATTTGTTAATATGCTGGATGGGATGTTTGCCTTTATTCTTCTTGATACCCGCGATAAAAGTTTTATTGCTGCTCGTGACGCTATTGGCATTACCCCTCTATACTTGGGTTGGGGTCATGATGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTGAGTGATGATTGTGAGAGATTCATTGCTTTTCCTCCAGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCACCGTGGTTTTCAGAGGATATTCCATCAACTCCCTATGATCCAATCCTTTTGCGTGAGACCTTTGAGAGGGCTGTAGTTAAGAGACTGATGACTGATGTACCTTTTGGAGTTCTTTTGTCTGGAGGATTGGACTCATCACTTGTTGCTTCTGTGGTCAATCGTTATTTGGCTGAATCTGAAACTGCTCGACAATGGGGATCACAGTTGCATACTTTCTGCATTGGTTTAAAGGGTTCTCCTGACTTGAAAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGTCACCATGAACTTTATTTCACAGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCATATTGAAACATATGATGTAACGACTATCAGAGCAAGTACGCCAATGTTTCTTATGTCCAGAAAAATTAAAGCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTACTTTCACAAGGCACCTAACAAGAAAGAGCTTCATGAAGAAACATGTCAAAAAATTAAAGCTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTGCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACGTAGCCATGAGTATAGATCCGGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAGTGGGTGTTACGCAATGCATTTGATGATGATAAGAATCCATATTTACCGAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGGGTTGGTTACAGCTGGATTGATGGCTTGAAGGATCACGCTAACAAACAAGTCACAGATGCAACGATGATGGCTGCCAATTTTATTTACCCTGAAAACACTCCTACTACAAAAGAAGGATACCTCTACAGGACAATTTTTGAGAAGTTCTTTCCAAAGAATTCAGCAAAGGCAACAGTGCCTGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCATCATGGTCCAAAAATCTTGATCCTTCTGGTCGTGCAGCGCTTGGTGTTCATGCAGCTGCATATGATGGTGCAGTGGATACAACCAAAAATGGACCCCTTTAA 1701 0.425 MCGILAVLGCVDNSQAKRARIIELSRRLRHRGPDWSGIDCYEDCYLAHQRLAIVDPTSGDQPLYNEDKTIVVTVNGEIYNHKQLRQKLSSHQFRTGSDCEVIAHLYEEYGEEFVNMLDGMFAFILLDTRDKSFIAARDAIGITPLYLGWGHDGSTWFASEMKALSDDCERFIAFPPGHIYSSKQGGLRRWYNPPWFSEDIPSTPYDPILLRETFERAVVKRLMTDVPFGVLLSGGLDSSLVASVVNRYLAESETARQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKKELHEETCQKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFINVAMSIDPEWKMIRPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKQVTDATMMAANFIYPENTPTTKEGYLYRTIFEKFFPKNSAKATVPGGPSVACSTAKAVEWDASWSKNLDPSGRAALGVHAAAYDGAVDTTKNGPL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1473 566 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Gso13g1473 566 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 209 485 - -
Gso13g1473 566 Gene3D HUPs 195 514 IPR014729 -
Gso13g1473 566 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Gso13g1473 566 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 558 - -
Gso13g1473 566 PIRSF Asn_synthetase_glu-h 1 360 IPR006426 GO:0004066|GO:0006529
Gso13g1473 566 PIRSF Asn_synthetase_glu-h 356 516 IPR006426 GO:0004066|GO:0006529
Gso13g1473 566 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Gso13g1473 566 CDD AsnB 2 192 IPR033738 -
Gso13g1473 566 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Gso13g1473 566 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Gso13g1473 566 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Gso13g1473 566 PANTHER ASPARAGINE SYNTHETASE 1 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1473 Gso-Chr13 30218613 30223931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1473 2 164 PRT Gene Family AT4G38880 26.214 7.27e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1473 K01953 - gmx:100788806 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0151 18 1271501 1277793 Gso13g1473 13 30218613 30223931 GST