Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1457 ATGCGTTGGAGCTCTACTAACTCAGAGGTGGTTGCTTCAAACAAAACCACGTTAGGAGAGATTTTGGACATTGAGAAAAACATGGCTAAGTGGGTGCTCAATGCTCCAGAGCCACCTTCCATGCTGCGTCAGGTCGTGGACAACGTCAAGGACACCCTCTTGCCACATCCAAATCCAAAGACATTCTCTTATCTCAGGAACCAACCCTTTTCCAAACGTGCCTTTGCCTTGTTGCAAGACTTGTTTCCCATTCTTCCTTCACTCCATAACTACAATGCCCAAAAGTTCAAGTGCGATTTCATGGCCGGTCTAACCCTTGCAATCTTCGCTATTCCTCAGTGTATGGGAAATGCGACATTGGCGCGGCTAAGTCCTGAATATGGCCTCTATACAGGAATTGTCCCACCTCTTATTTATGCCATGCTGGCGAGTTCAAGGGAGATAGTGATCGGACCTGGATCTGTGGATTCACTGCTACTTTCCTCAATGATCCAGACATTGAAAGTTCCTATTCATGATTCTATTACTTACAACCAACTTGTTTTCACTGTGACTTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGGCTCTTTAGGTTTGGTTTTCTGGTGGAATATCTTTCAGATCCCACGATCGTGGGGTTCTTGGCAGCAGCTGCCGTGAGCATTGGGCTACAACAATTGAAAGGATTATTTGGGATCGTTAACTTTACCAACAAAACTGGTTTATTTTCAGTGGTCAAATCTCTTTGGACATCGTTCAAAAACCAATCAGCCTGGCATCCCTACAATTTAATTATTGGATTCTCATTTCTCTGTTTCATCCTATTTACCAGATTCCTGGGCAAAAGGAACAAGAAACTGATGTGGTTGTCACACGTTGCTCCTCTCCTTTCTGTTATTGTATCCTCTGTTGTTGCATACAAAATAAACTTTAATGAGCTTCAAGTGAAGGACTACAAAGTTGAAGTCTTGGGACCAATTAAAGGGGGCAGCTCGAATCCAAGCTCACTCCATCAGTTAACATTTGATAGCCAAGTTGTGGGTCATTTGATCAGAATAGGGCTCACCATTGCTATTATTTCACTCACGGGATCTATTGCTGTTGGCCGATCATTTGCATCTCTAAAAGGACACAGTATTGATCCCAACAGAGAAGTGGTGTCCTTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGATCTTTGTCACGTACTGCTGTAAACTACAATGCTGGCTCTGAAACAATGGTGTCGAACATAGTGATGGCACTGACGGTTCTCATGTCACTTAAATTTTTGACGGGGCTTTTGTATTTCACTCCGAAAGCAATCCTTGCAGCAATAATTCTCTCGGCCGTACCGGGACTGATTGACCTTAACAAAGCACGTGAAATTTGGAATGTTGATAAAATGGATTTCCTTGCTTGCACTGGAGCCTTTTTGGGAGTCTTGTTTGCATCTGCAGAAATAGGCCTTGCAATTGGGATCACGATATCATTTGCGAAGATAATTATAACCTCAATTCAACCTGCTACAGCGGTTATTGGAAGGCTTCCAGGAACGGATGCATTCGGCGATGTTGAACAATATCCAATGGCGGTTAACATTCCTGGGGTTTTGATAGTCTCTTTAAAATCTTCTTGGCTTTGTTTTGCAAATGCAAATCTTGTGGAGGAAAGGATTGAGAGATGGGTGAACAATGCAAAAGCTAAGGAAGGAAGAGAAAGCACCTTCACATACGTCATTATTGATGCCTCAAGTCTTACGAATATTGACACCGCGGGAATAGCTTCTCTGGTGGAGCTCAACAAAAATCTGATTTCACGGGGAGTAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTGAGCAAAATTGGAGGAAGGATTTTCCTTTCTGTGGGAGAAGCAGTAGATGCATGTGTTGGCACTAAAATAATGGTTGTTGTATAA 2001 0.4273 MRWSSTNSEVVASNKTTLGEILDIEKNMAKWVLNAPEPPSMLRQVVDNVKDTLLPHPNPKTFSYLRNQPFSKRAFALLQDLFPILPSLHNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLARLSPEYGLYTGIVPPLIYAMLASSREIVIGPGSVDSLLLSSMIQTLKVPIHDSITYNQLVFTVTFFAGIFQVAFGLFRFGFLVEYLSDPTIVGFLAAAAVSIGLQQLKGLFGIVNFTNKTGLFSVVKSLWTSFKNQSAWHPYNLIIGFSFLCFILFTRFLGKRNKKLMWLSHVAPLLSVIVSSVVAYKINFNELQVKDYKVEVLGPIKGGSSNPSSLHQLTFDSQVVGHLIRIGLTIAIISLTGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSLSRTAVNYNAGSETMVSNIVMALTVLMSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKAREIWNVDKMDFLACTGAFLGVLFASAEIGLAIGITISFAKIIITSIQPATAVIGRLPGTDAFGDVEQYPMAVNIPGVLIVSLKSSWLCFANANLVEERIERWVNNAKAKEGRESTFTYVIIDASSLTNIDTAGIASLVELNKNLISRGVKLAIANPRWHVIHKLRLANFVSKIGGRIFLSVGEAVDACVGTKIMVVV* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1457 666 Gene3D STAS domain 516 659 IPR036513 -
Gso13g1457 666 ProSiteProfiles STAS domain profile. 556 657 IPR002645 -
Gso13g1457 666 Pfam Sulfate permease family 96 484 IPR011547 GO:0016021
Gso13g1457 666 SUPERFAMILY SpoIIaa-like 543 657 IPR036513 -
Gso13g1457 666 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Gso13g1457 666 PANTHER SULFATE TRANSPORTER 16 664 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso13g1457 666 CDD STAS_SulP_like_sulfate_transporter 537 648 - -
Gso13g1457 666 PANTHER EARLY NODULIN-70 16 664 - -
Gso13g1457 666 TIGRFAM sulP: sulfate permease 83 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso13g1457 666 Pfam STAS domain 537 653 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1457 Gso-Chr13 30054669 30062322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1457 25 662 Inorganic Solute Cotransporters AT5G10180 54.037 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1457 K17469 - gmx:100817841 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0167 18 1442612 1449776 Gso13g1457 13 30054669 30062322 GST