Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1456 ATGGCTTCTTCAGCTATGGAAACCTGCATATCCGAGGATTTGCACATGCAGGTTGACATTGAGAAGAAGGCGCAGGACATAAGGTCTCAGTGGGTGCTTAACGCTCCTGAGCCCCCGAGTCCATGGCGTGTGGTTGCAGATTCTGTGAGCAAAACCATCTCCCACTATAAACATAAGCTTTCCTCTCTCACAGATCAACCTTGCACCACACTCCTCCTTTCAGTTCTGCGGGTCATTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCTACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATTGCTAGTCTTTGTATTCCCCAGAGCATCGGATATGCCACCTTAGCACATCTTGATCCTCAATATGGCCTTTATACAAGTGTGGTACCACCACTTATCTATGCTGTAATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCAGTGGTTTCTCTGCTGTTATCATCAATGATGGTGAAATTAGTAGACCCTGCTACTGATCCAGTGGGTTATACAAAGCTGATTTTGCTTGCTACTCTCTTTGCTGGTATCTTTCAGACTTCCTTTGGACTCTTCAGGCTTGGGTTCCTTGTGGATCTCCTATCCCATGCTGCAATAGTAGGATTTGTAGCAGGAGCAGCCATTGTGATTGGGCTTCAACAGTTAAAGGGACTCTTAGGAATCACCCATTTTACGACCAAAACCGACATAGTCTCTGTCATGAAAGCTGTTTGGGAAGCAGTTCATAATCCATGGAGCCCTCGAAATTTTATCCTGGGATGCTCCTTCTTGGTCTTCATCCTAACGACGAGATTTTTGGGTAAAAGGAAGAAGAAGCTGTTCTGGTTGGCATCAATCTCTCCTCTTGTATCTGTTGTTGTGTCAACTCTGATTGTGTTTCTCACAAGAGCTGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGGGGGTTGAATCCAAGCTCCCTCCATCAGTTAGACTTCAATAACCCCTACATTGGAGAAGTGGCCAAAATTGGACTAGTGGTTGCTGTCGTTGCCCTTACTGAGTCTATTGCTGTTGGGCGATCCTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTTTGACAAACATCATAGGATCTTTCACCTCCTGCTACGTTGCAACCGGTTCATTCTCCCGTACGGCTGTTAATTATGCAGCTGGGTGTGAAACTTTGGTGTCAAACATTGTGATGGCCATAACAGTCTTGATATCATTGCAGTTTTTGACAAAGCTATTGTATTATACTCCAACAGCTATTCTTGCTTCTGTGATCCTCTCTGCCCTCCCAGGACTCATTGACGTTAGTGAAGCTTACAAAATTTGGAAGGTGGATAAGATAGACTTTCTTGCTTGCGCTGGGGCATTCTTTGGAGTACTGTTTGCTTCTGTGGAGATTGGTCTACTTGTTGCGGTGTTAATATCATTTTCGAAGATCATTCTGATCTCAATTCGACCAGGGACAGAAACTCTAGGAAAAATTCCCGGAACTGATTTGTTCTGCGATGTCTATCAGTATCCTATGGCAGTTAAGATTCCCGGGGTTATGATAATACGAGTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGAATCATCAAATGGGTCACTGAGGAAGAATCAGAAGATGACAAGGGAAATTCAAGAAGCACCATTCAACTCGTAATTCTTGACACCTCCAATTTGGTGAACATTGACACCTCTGGAATTACTGCTCTAGAGGAACTGCATAAGAGTTTGTCTTCACAAGGAAAACAGTTAGCCATTGCGAACCCTAGGTGGCAAGTGATACACAAGCTAAAGGTGTCCAACTTTGTCGGCAAAATCGGTGGCAGAGTCTTTCTGACTGTTGAAGAAGCTGTTGGCTGCAAGAGCCGCTGCTAA 1962 0.4399 MASSAMETCISEDLHMQVDIEKKAQDIRSQWVLNAPEPPSPWRVVADSVSKTISHYKHKLSSLTDQPCTTLLLSVLRVIFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMMVKLVDPATDPVGYTKLILLATLFAGIFQTSFGLFRLGFLVDLLSHAAIVGFVAGAAIVIGLQQLKGLLGITHFTTKTDIVSVMKAVWEAVHNPWSPRNFILGCSFLVFILTTRFLGKRKKKLFWLASISPLVSVVVSTLIVFLTRADKNGVKIVKHVKGGLNPSSLHQLDFNNPYIGEVAKIGLVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLISLQFLTKLLYYTPTAILASVILSALPGLIDVSEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVLISFSKIILISIRPGTETLGKIPGTDLFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVTEEESEDDKGNSRSTIQLVILDTSNLVNIDTSGITALEELHKSLSSQGKQLAIANPRWQVIHKLKVSNFVGKIGGRVFLTVEEAVGCKSRC* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1456 653 ProSiteProfiles STAS domain profile. 546 650 IPR002645 -
Gso13g1456 653 PANTHER SULFATE TRANSPORTER 2.1 31 649 - -
Gso13g1456 653 CDD STAS_SulP_like_sulfate_transporter 527 641 - -
Gso13g1456 653 Pfam Sulfate permease family 94 474 IPR011547 GO:0016021
Gso13g1456 653 Gene3D STAS domain 506 652 IPR036513 -
Gso13g1456 653 Pfam STAS domain 527 646 IPR002645 -
Gso13g1456 653 SUPERFAMILY SpoIIaa-like 531 647 IPR036513 -
Gso13g1456 653 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Gso13g1456 653 PANTHER SULFATE TRANSPORTER 31 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso13g1456 653 TIGRFAM sulP: sulfate permease 81 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1456 Gso-Chr13 30040181 30048072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1456 23 647 Inorganic Solute Cotransporters AT5G10180 69.649 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1456 K17469 - gmx:100781327 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0168 18 1454113 1459996 Gso13g1456 13 30040181 30048072 GST