Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso13g1427 | ATGGATTGTTGTGTGTGTACAACTATGCCATTGATATTAAGGCCTCCGAGGAATACAATATGTGGGGCTTGTTACGAAGGAGTTAGGAGCATAATCAACATGATGAGCAACATTGAAAGTGAGAAAGTAAAGGCAATGGCTAATCCAAATCAAAATAGTTCTCCAGTTTCGCGGCGAAATTCGAGTAAGATACTTGATGATTGTATTAGATGGTGTTCAGAACAGACGGAGCAGTTTAATCAACAAAAAGAAGACATGGTTTTCCTCAGAGGCTTTGTTGCAGCCTTCAAAGCACAGATTCACACGGATATATTGGTCAGTCCAGGCAGGAACGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCAGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGCGATGAATGCAAGGCAGCACCAAGTAACGCCATAACTATACCCGATTTGAACCATGAAGAACTAGAGTCTCTCCTTGAGTTTCTGTACAGTGGGACATTGAATGTGGAAAAATTGGAGAAACATGTCTACGCTTTGTCACAAGCAGCTGATAAGTATGTGATTCCACATTTGCTGAAACACTGCGAACGATATCTGCTGAGTTCACTAAGCACTTCCAATGCTCTTGAGACACTAGAAATTGCGGATACTTGTTCCAACCACAACTTGAAGGAGACAACCTTGAACTTCTTAGTTAAAAACATTGAGCACATGGTGTCCTCACCTAAATTTGAAGCTTTTGTCCATAGGAGCCCACATCTTACTGTGCAACTAGTTACAAGGGCGTTTGTGAATGGTGCCAAATAA | 810 | 0.4148 | MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNIESEKVKAMANPNQNSSPVSRRNSSKILDDCIRWCSEQTEQFNQQKEDMVFLRGFVAAFKAQIHTDILVSPGRNGPPIPAHKSVLAARSEIFKNMLECDECKAAPSNAITIPDLNHEELESLLEFLYSGTLNVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIADTCSNHNLKETTLNFLVKNIEHMVSSPKFEAFVHRSPHLTVQLVTRAFVNGAK* | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso13g1427 | 269 | SMART | BTB_4 | 102 | 204 | IPR000210 | GO:0005515 | |
Gso13g1427 | 269 | Gene3D | Potassium Channel Kv1.1; Chain A | 70 | 205 | IPR011333 | - | |
Gso13g1427 | 269 | Gene3D | - | 206 | 267 | - | - | |
Gso13g1427 | 269 | ProSiteProfiles | BTB domain profile. | 102 | 172 | IPR000210 | GO:0005515 | |
Gso13g1427 | 269 | PANTHER | BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED | 1 | 268 | IPR044784 | - | |
Gso13g1427 | 269 | SUPERFAMILY | POZ domain | 88 | 203 | IPR011333 | - | |
Gso13g1427 | 269 | Pfam | BTB/POZ domain | 101 | 203 | IPR000210 | GO:0005515 | |
Gso13g1427 | 269 | PANTHER | BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED | 1 | 268 | - | - | |
Gso13g1427 | 269 | CDD | BACK | 205 | 245 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso13g1427 | Gso-Chr13 | 29761714 | 29764014 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Gso13g1427 | BTB | 2.2e-21 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso13g1427 | K10523 | - | gmx:100814664 | 540.421 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso18g0192 | 18 | 1666989 | 1668852 | Gso13g1427 | 13 | 29761714 | 29764014 | GST |