Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1426 ATGGTTTCTAGAGAGCAAAAAAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTATAACCAACTCTCATGCTCTAAACAAAACCTCGATCATAATAGATGCATCAAAGTATATCGAAGAGTTAAAGCAAAAAGTAGAAAGACTGAATCAACACGTAGCCAATGCACAAACTTCAAGTGACCAAAATACTTTGCCTATGGTTACAGTAGAAACCTTAGAGAAGGGGTTTCTTATAAATGTTTATTCAGCAAAGACCTGCCCTGGTTTACTTGTTTCCATATTGGAGTCATTTGAAGAGATTGGTCTTAATGTGCTTGAAGCTAGGGTTACTTGTACGGACACCTTTCGATTTCATGCTGTTGGAGGAAAAAATGAAGAACAAGGTGATGAGGGTATTGATGCACAAACTGTGAAACAGGAATTGGGACAAGCAATAAAGAACTGGAGCCAAAATGCTGACCAAAAGTAA 474 0.3861 MVSREQKRAALHEKLQLLRSITNSHALNKTSIIIDASKYIEELKQKVERLNQHVANAQTSSDQNTLPMVTVETLEKGFLINVYSAKTCPGLLVSILESFEEIGLNVLEARVTCTDTFRFHAVGGKNEEQGDEGIDAQTVKQELGQAIKNWSQNADQK* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1426 157 PANTHER TRANSCRIPTION FACTOR SCREAM-LIKE PROTEIN 1 155 - -
Gso13g1426 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 155 - -
Gso13g1426 157 CDD ACT_UUR-ACR-like 89 147 - -
Gso13g1426 157 Coils Coil 33 60 - -
Gso13g1426 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1426 Gso-Chr13 29756803 29758464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1426 11 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.268 4.15e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1426 - - gmx:100814138 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0193 18 1672435 1674146 Gso13g1426 13 29756803 29758464 GST
Gso13g1426 13 29756803 29758464 Gso14g0458 14 4373247 4375133 PCT
Gso14g0458 14 4373247 4375133 Gso13g1426 13 29756803 29758464 PCT