Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1424 ATGTCACCGGTCGCCGGAGTCAGTGCCCCCCTCCTGGGGGAATCCAAAGCAGCGACGCCGCCGGCTTCCGTCCCCGGCGCGGTGTTCAACGTGGCGACAAGCATAGTCGGCGCCGGAATCATGTCGATTCCGGCGATCATGAAGGTTCTCGGCGTGGTGCCAGCATTCGCGATGATTCTCGTGGTGGCCGTTCTCGCGGAACTGTCGGTGGACTTCCTGATGCGGTTCACGCACTCCGGCGAAACGATGACGTACGCCGGCGTTATGAGGGAAGCGTTCGGATCGGCCGGAGCGTTGGCCGCGCAAGTTTGCGTCATCATCACCAACGTCGGGGGCTTAATTCTCTACCTTATCATCATCGGGGATGTGCTATCTGGAAAGCAAAATGGAGGTGAAGTGCATTTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTTGCTTTGCTTTTCACCTTGGTCTTCGTTATGCTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGTTTGGCTATCACAGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCGGTTAGACTACCAAACGTCATTCTTTGATCTGTTCACTGCAGTTCCTGTTGTTGTCACAGCCTTCACATTTCATTTTAATGTGCATCCCATTGGGTTTGAGCTTGCCAAGGCATCCCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACCTTGCAATAGGTCTATTTGGGTACATGCTATTTGGGGATTCAACCCAGTCAGACATTCTCATCAATTTTGACCAGAATGCTGGTTCTGCAATTGGTTCCTTTCTCAATAGTTTGGTCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCTCTATTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTTCTCTTCCCTAAGAAGCCTATGCTAGCCACAGACAACAAAAGATTTATGATCCTCACTCTGGTGCTGCTTGTATTCTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTCCTGGGATCATCATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTAAGAGATGTCCATGGTATATCAACAAGAAGAGACAAAATTATTGCACTGGTAATGATTATACTAGCCGTGGTTACAAGTGTGCTTGCCATTTCCACCAATATATTTAATGCTTTTAGTAGCAAGTCATAA 1311 0.4744 MSPVAGVSAPLLGESKAATPPASVPGAVFNVATSIVGAGIMSIPAIMKVLGVVPAFAMILVVAVLAELSVDFLMRFTHSGETMTYAGVMREAFGSAGALAAQVCVIITNVGGLILYLIIIGDVLSGKQNGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMLPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAITALVQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASQMTTAVRLALLLCAVIYLAIGLFGYMLFGDSTQSDILINFDQNAGSAIGSFLNSLVRVSYALHIMLVFPLLNFSLRANIDEVLFPKKPMLATDNKRFMILTLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDVHGISTRRDKIIALVMIILAVVTSVLAISTNIFNAFSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1424 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
Gso13g1424 436 Pfam Transmembrane amino acid transporter protein 22 423 IPR013057 -
Gso13g1424 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1424 Gso-Chr13 29743005 29745491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1424 10 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.808 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1424 - - gmx:100813056 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0195 18 1685961 1688756 Gso13g1424 13 29743005 29745491 GST
Gso13g1424 13 29743005 29745491 Gso14g0461 14 4396824 4402417 PCT
Gso14g0460 14 4389668 4392341 Gso13g1424 13 29743005 29745491 PCT