Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1395 ATGTTAGTGAGAGGCATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCATGTGCAGCTTGCAAGTTATTGAAGAGAAGATGCATACCAAATTGTATTTTTGCACCTTACTTTAGGTCTGATGAGTGCAAGAAGTTTGCAAAGGTGCACAAGGTGTTTGGAGCAAGCAATGTGAGCAAGATTCTGATTGAAGTGCCGGAAGAGCAGAGAGAGGACACAGTGAATTCTCTTGCTTATGAGGCTGAGGCAAGGCTGAGAGACCCGGTTTATGGATGCATTGGTGCCATAGCTCTGTTGCAAAGGAAGATGGTGGAGCTTCAACATGATCTGGTCATCGCAAAGGATCGTCTCGCGCGTTGTCACGCTGCTGCTACTGCTGCTGCCACCACCACCACTACTAGTATCCCTTCTCCTGATATCTTGCATGCCAATGTTAGCCTTCCCCCATTCCCTGACTTTTACACTTCTTCAAGTGACTTCAATGATATCTTCTGCCACAGTTCTTCGTCTCAATTATTGAGCCGACATGAAACGGTGGATGATTTCAATCAAATCCCATATATATTTTAA 567 0.4533 MLVRGMKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLVIAKDRLARCHAAATAAATTTTTSIPSPDILHANVSLPPFPDFYTSSSDFNDIFCHSSSSQLLSRHETVDDFNQIPYIF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1395 188 Coils Coil 95 115 - -
Gso13g1395 188 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Gso13g1395 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 182 - -
Gso13g1395 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 6 182 - -
Gso13g1395 188 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1395 Gso-Chr13 29483887 29484835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1395 6 152 AS2 family AT3G11090 65.306 5.56e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso13g1395 LOB 2.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1395 - - gmx:100305534 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0225 18 1933860 1934800 Gso13g1395 13 29483887 29484835 GST