Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1381 ATGAAGAAGACAGCTGGAACCGTTGGATACATTGATCCTGAGTACTTAGCTGGACATGTGGTGACAGCAAAGAGTGATGTGTATGGGCTTGGAGTTGTACTTCTTGAACTTTTAACGGGTAAGACAGCTATATTCAAGTCTGGGGACGATGGAGGCAGTGTGGTGGACTTTGCAGTGCCTCATATTTTGTCTGGAGAATGGGTGAAAATTTTGGATCCAAGGATTGGACCTCCTGACGAGAATGAAGCAGATGCAGTCGAGTTAGTGGCCTACACAGCTCTCCATTGTGTGAAATTGGAAGGGAAAGATAGACCAACCATTGTTGAAGTAGTGGTCAATTTGGAGAGCGCTTTGGCTAGTTGTTGTCATAGCAGCCATGAAAGGATTTCCAGCGCTACTATCCCTGTTGTTTCTGTTGTTTTACCTACCAAAAAGAAAAAAGAAAAATTTCTGTTGTTTCACAATGATATAGTTCAACCCGGGGAAAGTTGGGAGCAAATATTGTTGAATTTATGA 516 0.4264 MKKTAGTVGYIDPEYLAGHVVTAKSDVYGLGVVLLELLTGKTAIFKSGDDGGSVVDFAVPHILSGEWVKILDPRIGPPDENEADAVELVAYTALHCVKLEGKDRPTIVEVVVNLESALASCCHSSHERISSATIPVVSVVLPTKKKKEKFLLFHNDIVQPGESWEQILLNL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1381 171 Pfam Protein kinase domain 2 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1381 171 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 2 126 IPR044815 GO:0004674
Gso13g1381 171 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Gso13g1381 171 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1381 171 SUPERFAMILY Protein kinase-like (PK-like) 3 114 IPR011009 -
Gso13g1381 171 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 2 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1381 Gso-Chr13 29321231 29322770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1381 3 138 Receptor kinase-like Gene Family AT3G55950 58.333 2.28e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso13g1381 Pkinase 2.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1381 - - gsj:114381854 335.88