Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1372 ATGGGTAAAAAAAAATACTATTTACAGGGACTTGACAATGTCTATCTTAATTTTTTTTTGTTCCTAATCTATTATTATGCAGAGGCACGAGTGGTGGAGGCAAAGATATGCGAAAAGTACAGCAAAACATGGTCAGGGTGGTGTGGCAACTCTAACCACTGTGACAACCAATGCAAGAAATGGGAAGGTGCAAAATTTGGATCATGTCACTGGGACTTGGGCGGAAGGCTTGTTTCTGCTACTTCAACTGTCCAGGTTTATGTGCTAAGCGCAGCAAGACATGGTCTGGTTGGTGTGGCAGCTCCAACAACAGTGGCAAGCAATGCAGGACTAAGGAAGGTGCAATTCATTGAGCTTGTCACGTTAACGTTCGGGCTTGTGACTGTTATGTAA 393 0.4351 MGKKKYYLQGLDNVYLNFFLFLIYYYAEARVVEAKICEKYSKTWSGWCGNSNHCDNQCKKWEGAKFGSCHWDLGGRLVSATSTVQVYVLSAARHGLVGVAAPTTVASNAGLRKVQFIELVTLTFGLVTVM* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1372 130 CDD Knot1 46 71 IPR003614 GO:0006952
Gso13g1372 130 SUPERFAMILY Scorpion toxin-like 34 72 IPR036574 -
Gso13g1372 130 ProSitePatterns Gamma-thionins family signature. 35 58 IPR008176 GO:0006952
Gso13g1372 130 SMART gth_4 36 73 IPR003614 GO:0006952
Gso13g1372 130 Pfam Gamma-thionin family 35 70 - -
Gso13g1372 130 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 18 74 - -
Gso13g1372 130 Gene3D - 36 77 IPR036574 -
Gso13g1372 130 PANTHER DEFENSIN-LIKE PROTEIN 1 18 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1372 14 75 Plant Defensins Gene Families AT1G19610 48.387 2.82e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1372 - - gmx:102670378 253.062