Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1370 ATGGAAGATCAATACGTAAAACGAAGCGTAACTACAGGATGTTACAACGTAGATGTGTCAAATCCCAATGATATATGGAAAAGTGAAAACATCCTGTTTTTCTACCTTCCTAACTTTGCAGCCCAAGTTGCTTTTATGTTGTTGTCCACTCGTCTTTTGTACTACATCCTCAGACCCTTGAACCAACCTCGTCTTGTATCTGAGATTTTGATTGGTATTCTGATAAGTCCTGAACTATTTGGAATATCTGCTTTATCTGAGGTTCTGACCCCTATAAAGTCAATCCTAACTACTGAAACCATATCATATGTGGGACTCGTTTACTCTGTGTTCCTGGCTGGCTTGGACATGAACTTTGACACAATCCTAGGAGCAAGAAAGAAGGCCACAAGCATTGCAATTGCTGGCATTGTCATCCCAATGGTATTGGGTGCTGGCATATATGCTTTGACTCTAAGCATGTACAAGGGACCTGCTGAGTATTGGGCAAATTTCAACACCACTAATGCTTATATGTTTTGGGCCTTAATTTTAAGTGTCACAGGTTTTCCTATGGTTAGTCACATCCTTGCTGATCTCAAGCTCCTCTACACAGGACTTGGCAAAGTGGCGTTAACAACAGCTATGGTCAGTGACTTCTATAATTGGGTCATGTTTGCAATGTTGATTCCATTCGCCATCAACGGGGCAAGCGCCATCTACTCGGTGCTTGGAACCATAGGTTTTGCGCTTTTATGCTTCTTTGTTGTGCGGCCTTATTTGGTACAGATAATAGTGAGCAAAACCAATAAAAATGAGTGGGACAATTATGGGTTGTTCTTTGTGATCATGGGATCTTATGCTAGTGCACTTGTTACTGATCTCCTAGGGACACACCCTGTGGTTGGGGCTCTGGTGTATGGAATAATGATACCTCGTGGTAAATTTACTCAGATGCTCATAGAGAAGTCAGAGGATTTTGCAGCTGTTTATCTGGCTCCATTGTTCTTTGGTAGCATTGGAATAAGACTCAGAATAGTATATGTTGTAAACACTCAAGGTTTGGGCCTGGTGCTTTTGATTTTGTTCCTCTCTTTCATCCCAAAGATTTTAAGCACTGTTATAGCGACTCAATTTTATGGCATGTCTGTTCTTGATGGTGTCTCAATTGGACTGCTTATGAACACCAAGGGCATCTTACCAGTATTAATGCTCGTCAACGCCTGGGACAAGCAGATTTTGAGTGTGGAGTCCTTCTCAATTTTGACAGTAGCTGTTGTTATGATGACAATGATGGTGCCTCTAATCATCAATGCCATATACAAGCCTAGGAAGTTATACAAGCAAAGTAAACTAAAGACCATACAGAACTTAAAGGGCGACATAGAGCTGAGAATACTAGCTTGTGTTCACAACCCTCGGCAAGCCACAGGAATGGTCAACATTCTCGATGCATGCCACACCACAAAACTCTCCCCTCTGCGCGTTTTTGCGCTTCAGCTTATTGAACTAACTGGAAACACCACTTCCCTTTTGGCTTCTCATCTCAATCAGCACAACCAACAGCAGAGTGGTAGAGCACAAGCCCTCACAAAAGCACAAGAAGACTTGGAGAGCATCACCAACATTTTCCAAGCATACACAGGCACAAATGAGAACACCAGTGTGGAGACATTTGCTGCAGCATCAACTTACTCAACCATTCATGAGGACATATACAACGTGTCGCAGGAGAAGCAAGCGAACTTGATTCTCCTTCCTTTCCACAAACAGTCAAACATAGAGGGCATTCTGGAGACAACAAACACTGCATTCCAAGACATAAACCGAAATGTGATGAGGGATGCACCGTGTTCTGTTGGAATCTTTGTCGACCGTGGACTAGGATCATTGTTCAAGGTGAACTTGCGCATGCTCATGCTTTTCATTGGTGGCCCAGATGACCGCGAGGCCTTGGCGGTCGCGTGGAGGATGTCAAAGCATCAAGGGGTGCAACTATCAGTGATGAGGATCCTTATGTATGGTGAGGCTGCAGAAGTTGATGTTTTGTCGTCCCATCTTGAGTCTCGCGGACTGTTAGCCATGGTGCTAGACAGTGAAAGGCAAAAGGAATTGGATGAAGAGTATGTGAGTGCATTTAGGCTCAAGGCAGTGAGCAATGAAGATTCTATTAAGTATTCAGAGAAAGAAGCTCGTTGTCGTGATGATATTCCTCGAGTGCTTAAAGAGATTGAAGAAATTGGGTATGATTTGTATATTCTAGGACAAGGGACAGGTAGGAACTCATTGATCTTGTCAGAGTTGATGCAATGGGCTGATTGCCCTGAACTTGGTGTTATAGGGGACATAGTGGCATCAAACAGTTTTGGTTCAAGCTCTTCAGTGCTTGTTGTACAGCAATATGGTTTTGGGGGAATGGTGTTTGATAATAGTAATGCTGCCACACAGCAGCAACCTAGGGAAGTAGTGCCTGCAGATGATGATGATGATTCTGGGGCACTTGCTATCAAGGTAGAACAGCATCATCAGTGA 2511 0.4337 MEDQYVKRSVTTGCYNVDVSNPNDIWKSENILFFYLPNFAAQVAFMLLSTRLLYYILRPLNQPRLVSEILIGILISPELFGISALSEVLTPIKSILTTETISYVGLVYSVFLAGLDMNFDTILGARKKATSIAIAGIVIPMVLGAGIYALTLSMYKGPAEYWANFNTTNAYMFWALILSVTGFPMVSHILADLKLLYTGLGKVALTTAMVSDFYNWVMFAMLIPFAINGASAIYSVLGTIGFALLCFFVVRPYLVQIIVSKTNKNEWDNYGLFFVIMGSYASALVTDLLGTHPVVGALVYGIMIPRGKFTQMLIEKSEDFAAVYLAPLFFGSIGIRLRIVYVVNTQGLGLVLLILFLSFIPKILSTVIATQFYGMSVLDGVSIGLLMNTKGILPVLMLVNAWDKQILSVESFSILTVAVVMMTMMVPLIINAIYKPRKLYKQSKLKTIQNLKGDIELRILACVHNPRQATGMVNILDACHTTKLSPLRVFALQLIELTGNTTSLLASHLNQHNQQQSGRAQALTKAQEDLESITNIFQAYTGTNENTSVETFAAASTYSTIHEDIYNVSQEKQANLILLPFHKQSNIEGILETTNTAFQDINRNVMRDAPCSVGIFVDRGLGSLFKVNLRMLMLFIGGPDDREALAVAWRMSKHQGVQLSVMRILMYGEAAEVDVLSSHLESRGLLAMVLDSERQKELDEEYVSAFRLKAVSNEDSIKYSEKEARCRDDIPRVLKEIEEIGYDLYILGQGTGRNSLILSELMQWADCPELGVIGDIVASNSFGSSSSVLVVQQYGFGGMVFDNSNAATQQQPREVVPADDDDDSGALAIKVEQHHQ* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1370 836 PANTHER CATION/H+ EXCHANGER 3 4 833 - -
Gso13g1370 836 MobiDBLite consensus disorder prediction 815 836 - -
Gso13g1370 836 PANTHER CATION/H + ANTIPORTER 4 833 - -
Gso13g1370 836 Pfam Sodium/hydrogen exchanger family 46 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso13g1370 836 MobiDBLite consensus disorder prediction 808 836 - -
Gso13g1370 836 Gene3D - 38 443 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1370 Gso-Chr13 29227083 29230350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1370 14 794 Antiporter Super Family AT2G13620 36.662 8.05e-178 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1370 - - gmx:100802381 1594.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0248 18 2151700 2153893 Gso13g1370 13 29227083 29230350 GST