Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1366 ATGGCTTCTTTGCCAACACTTCTCTCGTTCGCCGTCATCTTCTTCACCGTCGCCCTCTTATACCTCCGCCGCGTGTTCCGCCGCCGTCAGTTCCGCCTCCCGCCGGGGAGCCACGGCCTGCCGTTGATCGGCGAGACGCTGCAGCTGATATCGGCGTACAAGAGCGACAATCCGGAGCCTTTCATCGACGAGCGCGTGGAGCGGTACGGTTCGATCTTCACGACGCACGTGTTCGGCGAGCCGACGGTGTTCTCGGCGGACCCGGAGGTGAACCGGTTCATTCTGCAGAACGAAGGGAAGCTGTTGGATTGCAGTTATCCCGGTTCGATATCGAACCTGCTCGGAAAACACTCTCTTCTGTTGATGAAAGGTGCTCTCCACAAGAGAATGCACTCTCTCACAATGAGCTTCGCCAACTCCTCCATCATCAAGGATCATCTTCTTCACCACATCGACCGCCTCATCTGCCTCAACCTCGATGCCTGGTCCGACACTGTCTTTCTCATGGATCAGGCAAAAAAGATAACATTTGAGTTAACGGTGAAGCAGTTGATGAGCTTTGACCCAGATGAATGGACTGAGAATCTAAGGAAAGAGTATGTTCTTGTGATTGAAGGATTCTTCACTCTCCCTTTTCCTCTCTTCTCCACCACATACCGCAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTAGCGTTGGTAGTGAGGCAGAGGAGAAAAGAGTATGGTGAAAACAAAGAGAAAAAGAGTGACATGCTTGGGGCACTGTTGGCCTCCGGCGACCACCTTTCCGACGAGGAAATAGTGGATTTTTTGTTGGCTTTGCTCGTCGCTGGTTACGAAACCACCTCTACCATAATGACTCTTGCGATCAAGTTCCTCACTGAGACTCCTCTGGCCTTGGCACAGCTCAAGGAAGAGCATGACCAAATCAGAGCAAAGAGTCACCCAGGGGCACCACTGGAATGGACGGATTACAAGTCAATGGCATTTACTCAATGTGTTGTGAATGAGACCTTGAGAGTGGCAAACATAATTGGTGGGATATTTAGGAGAGCAACGACAGACATCAACATAAAAGGTTACACTATTCCTAAGGGATGGAAAGTCTTTGCATCATTTCGTGCTGTACATCTGAATCCTGAACATTACAAAGATGCCCGGTCCTTCAATCCCTGGAGATGGCAGAGTAACTCATCAGAAACAGCAAATCCTGGGAATGTTTATACACCATTTGGAGGAGGGCCAAGGTTGTGCCCTGGCTATGAGCTAGCCAGAGTTGTACTGTCTGTCTTCCTTCACCGCATTGTTACCCGCTTCAGTTGGGTTCCTGCTGAGGAAGATAAGTTGGTGTTTTTTCCAACTACTAGGACGCAGAAGAGGTATCCTATTATTGTGCAGCGTAGACATTAG 1419 0.5004 MASLPTLLSFAVIFFTVALLYLRRVFRRRQFRLPPGSHGLPLIGETLQLISAYKSDNPEPFIDERVERYGSIFTTHVFGEPTVFSADPEVNRFILQNEGKLLDCSYPGSISNLLGKHSLLLMKGALHKRMHSLTMSFANSSIIKDHLLHHIDRLICLNLDAWSDTVFLMDQAKKITFELTVKQLMSFDPDEWTENLRKEYVLVIEGFFTLPFPLFSTTYRRAIKARTKVAEALALVVRQRRKEYGENKEKKSDMLGALLASGDHLSDEEIVDFLLALLVAGYETTSTIMTLAIKFLTETPLALAQLKEEHDQIRAKSHPGAPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRATTDINIKGYTIPKGWKVFASFRAVHLNPEHYKDARSFNPWRWQSNSSETANPGNVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVQRRH* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1366 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Gso13g1366 472 Gene3D Cytochrome P450 24 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 Pfam Cytochrome P450 34 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PANTHER CYTOCHROME P450 90A1 11 469 - -
Gso13g1366 472 SUPERFAMILY Cytochrome P450 26 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PANTHER CYTOCHROME P450 26 11 469 - -
Gso13g1366 472 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1366 472 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1366 Gso-Chr13 29182846 29188546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1366 122 471 Cytochrome P450 AT5G05690 79.143 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1366 K09588 - gmx:100795125 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0251 18 2186501 2192156 Gso13g1366 13 29182846 29188546 GST
Gso13g1366 13 29182846 29188546 Gso14g0507 14 4859869 4866534 PCT
Gso13g1366 13 29182846 29188546 Gso2g2183 2 46508927 46515208 PCT
Gso14g0507 14 4859869 4866534 Gso13g1366 13 29182846 29188546 PCT
Gso2g2183 2 46508927 46515208 Gso13g1366 13 29182846 29188546 PCT