Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1365 ATGGCCACTGCCACCGCCGCCGCCGCCACGTCATACTTTTTCGGCACCCGTCTCAACAACGTTAACACGACAACCTTAAACAACGGAAGATTCCACGCGCTCTTGAACTTCGGCAAAAAGAAGACGGCGCCGCAGCCGCCGCCGAAGAAAAAGGAAGTGAAAGTGAAACCCTCCGGAGACCGGCTGGTGTGGTTCCCGAATGCGGAGCCGCCGGAGTGGCTCGATGGAAGCATGATCGGCGACCGCGGGTTCGACCCGTTCGGGTTCGCGAAGCCCGCGGAGTACCTGCAGTTCGACCTGGACTCGCTGGACCAGAACCTCGCGAAGAACATCGCCGGCGATGTGATCGGAACCAGGGTGGAGGTCGCCGAGGTTAAGCCGACGCCGTTTCAGCCCTACTCGGAGGTTTTCGGGATTCAGAGGTTCCGTGAGTGCGAACTCATTCATGGAAGGTGGGCAATGCTGGGTTCTCTCGGTGCTTTGGCCGTTGAGGCTCTCACGGGAGTCGCATGGCAAGACGCCGGAAAGGTAGAGCTAGTGGAAGGATCATCTTACCTGGGACTTCCTCTTCCATTTTCATTGACCACACTGATCTGGATTGAGGTGATAGTGATAGGGTACATAGAGTTTCAAAGAAATGCAGAACTTGACCCAGAGAAAAGGTTGTACCCAGGTGGCAGGTTCTTTGATCCTCTGGGTTTGGCCAACGACCCTGAAGAAAAAGCCAGACTTCAACTTGCTGAGATCAAGCATTCTCGCTTAGCCATGGTGGTCTTCCTCATCTTTGCAATTCAAGCTGCTGTGACAGGAAAAGGCCCAATCAGTTTTCTTGCTACCTTCAACAAGTGA 849 0.5465 MATATAAAATSYFFGTRLNNVNTTTLNNGRFHALLNFGKKKTAPQPPPKKKEVKVKPSGDRLVWFPNAEPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNIAGDVIGTRVEVAEVKPTPFQPYSEVFGIQRFRECELIHGRWAMLGSLGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLATFNK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1365 282 Pfam Chlorophyll A-B binding protein 70 266 IPR022796 -
Gso13g1365 282 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 282 IPR001344 GO:0009765|GO:0016020
Gso13g1365 282 SUPERFAMILY Chlorophyll a-b binding protein 58 279 - -
Gso13g1365 282 Gene3D Chlorophyll a/b binding protein domain 63 282 - -
Gso13g1365 282 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1365 Gso-Chr13 29158565 29162419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1365 14 279 Chloroplast and Mitochondria Gene Families AT3G08940 70.677 8.05e-135 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1365 K08915 - gmx:100794604 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0252 18 2204501 2207352 Gso13g1365 13 29158565 29162419 GST