Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1355 ATGGAAGAGGGCATGTCAGAGTTTTTTATTAGCGGTGTAAGTGTTGGTGGTAACAGTGGCAGTGCTACTACTGGCACCAAGTGTGGGCGTTGGAATCCCACTACTGAACAGGTTAAGGTTCTGACTGAACTTTTCAGTTCTGGACTACGCACCCCCAGCACTGATCAGATTCAAAAGATCTCTAATCAGCTTAGTTTTTATGGTAAGATTGAGAGCAAGAACGTGTTCTATTGGTTTCAGAACCATAAGGCTAGGGAGAGACAAAAGCGTCGCAAGGTTGATAAGGATGTGATTCGTAGTGAAAACTCTATCTCCATCAATTCTTTTACACAAAATTTTAATCAGCTATATCAGGTTTCTGAGCCCGAGAGGGTGATTGAGACTCTTCAGCTCTTCCCCTTGAATTCATTTGGTGAATCAGAATCAAAGAATATGAGGGTCCATGCAAGTGATCAATGCAGGGATAGCACTATGTTTTCATACACAGTGGGGGAACAAATGGATCACCCACCATTAGATCTTCGCTTGAGTTTTATGTGA 540 0.4241 MEEGMSEFFISGVSVGGNSGSATTGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVDKDVIRSENSISINSFTQNFNQLYQVSEPERVIETLQLFPLNSFGESESKNMRVHASDQCRDSTMFSYTVGEQMDHPPLDLRLSFM* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1355 179 CDD homeodomain 30 90 IPR001356 GO:0003677
Gso13g1355 179 Pfam Homeodomain 28 88 IPR001356 GO:0003677
Gso13g1355 179 SUPERFAMILY Homeodomain-like 29 91 IPR009057 -
Gso13g1355 179 SMART HOX_1 26 93 IPR001356 GO:0003677
Gso13g1355 179 Gene3D - 27 94 - -
Gso13g1355 179 ProSiteProfiles 'Homeobox' domain profile. 24 89 IPR001356 GO:0003677
Gso13g1355 179 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 168 - -
Gso13g1355 179 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 168 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1355 Gso-Chr13 29041060 29042265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1355 8 179 Wox Gene Family AT3G11260 56.831 8.75e-62 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso13g1355 Homeodomain 2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1355 - - gmx:100800233 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0263 18 2312960 2313890 Gso13g1355 13 29041060 29042265 GST
Gso13g1355 13 29041060 29042265 Gso2g2168 2 46346935 46348370 PCT
Gso2g2168 2 46346935 46348370 Gso13g1355 13 29041060 29042265 PCT