Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1351 ATGTCGGACGCTTTGATCAATGGATTGGCCGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACTTACCCACTTCAAACTGTAAATACTCGTCAACAAACCGAGCGTGATCCGAAGAAAGACACGAGGAGTCAAGGGACCCTTGAACGAATGTGCCAGGTTGTAAAAGAAGAGGGGTGGGAACGGTTGTATGGAGGCTTGATGCCATCGGTAGTGGGTACAGCTGCGTCTCAGGGTGTTTACTATTATCTCTATCAAATATTCAGGAACAAAGCTGAAGCAGCTGCACTACAACAAAAGAAAATGGGCGTCGGCGATGGATCAGTTGGGATGCTCTCCTCACTTGTTGTTGCTGTTTTATCTGGGTCTGTTAACGTGCTGTTGACAAATCCCATATGGGTAGTTGCTACGCGTATGCAGACACATAGAAAAGAGTTGAACAGAACTCCAGCTGATCAGGGTTTGTTAGTTTCCACTGAGCAGCCAATTCTTTCTGCAGTTGAGCATCTTCCTTATGGAACTAGTCAGGTGATTCAAGAAATCTACAGTGAAGCTGGAATTTTGGGTTTCTGGAAAGGTGTATTACCAACATTAATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAGCCATGTTGGTGAAGTTAAGAAAAAGACGTGCTTGGAGTAAGAAGGGTAGCAATGGGGTAACTGCTTTAGAGATATTTCTTATTGGAGCTTTAGCTAAGCTTGGAGCTACTGTTGTAACCTATCCGATCCTAGTTGTGAAGGCAAGGCTCCAAGCTAGACAGGACAAAACTGGAGACAAGAGGCACCATTACAAAGGTACATGGGATGCTATTATAAAAATGATCCGTTATGAAGGGTTTAATGGGTTTTACAATGGTATGGGCACAAAAATTGTACAAAGTGTGCTGGCTGCTGCTGTTTTGTTCATGATGAAGGAAGAACTAGTTAGGGGGGTTCGTTTCTTGCTTGCCAATGATGCTGTAAAGCCAAAGCATCCGTGA 1017 0.4425 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKDTRSQGTLERMCQVVKEEGWERLYGGLMPSVVGTAASQGVYYYLYQIFRNKAEAAALQQKKMGVGDGSVGMLSSLVVAVLSGSVNVLLTNPIWVVATRMQTHRKELNRTPADQGLLVSTEQPILSAVEHLPYGTSQVIQEIYSEAGILGFWKGVLPTLIMVSNPSIQFMLYEAMLVKLRKRRAWSKKGSNGVTALEIFLIGALAKLGATVVTYPILVVKARLQARQDKTGDKRHHYKGTWDAIIKMIRYEGFNGFYNGMGTKIVQSVLAAAVLFMMKEELVRGVRFLLANDAVKPKHP* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1351 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Gso13g1351 338 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 334 IPR044712 GO:0006862|GO:0055085
Gso13g1351 338 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 334 - -
Gso13g1351 338 Gene3D Mitochondrial carrier domain 98 324 IPR023395 -
Gso13g1351 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Gso13g1351 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Gso13g1351 338 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Gso13g1351 338 Pfam Mitochondrial carrier protein 233 322 IPR018108 -
Gso13g1351 338 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Gso13g1351 338 SUPERFAMILY Mitochondrial carrier 3 319 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1351 Gso-Chr13 28984925 28990737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1351 24 322 Chloroplast and Mitochondria Gene Families AT2G47490 31.023 3.60e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1351 K13354 - gmx:100789858 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0268 18 2372286 2378124 Gso13g1351 13 28984925 28990737 GST