Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1328 ATGACAATGGATACTTGTAAAACCTCTCCACATTTGCTGATACTTCTTTGCTTTGCTTCATTTCTCCAACTATGTCATTCAGCATCCCAACAAAAGAGCTACATTATCTACACTGGCAATAGCATGAATGATGAGGCTTCTGCGTTGACTCTTTATTCAGACATGCTACAAGAAGTTGCAGACAGCAATGCTGAGCCCAAGTTAGTACAGCACCACTTCAAGCGTAGTTTCAGTGGCTTTGTTGCTATGCTAACAGAGGAGGAAGCCAATAGAATGGCTAGACATGATAGAGTTGTAGCAGTCTTTCCTAATAAAAAGAAGCAACTCCATACAACAAGGTCATGGGATTTTATTGGCTTTCCACTACAAGCAAATAGAGCACCAGCTGAAAGTGATGTCATCATTGCAGTATTTGACTCTGGAATCTGGCCAGAATCTGAGAGCTTCAATGACAAAGGTTTCGGTCCACCACCTAGTAAATGGAAGGGCACCTGCCAAACTTCTAAAAATTTCACATGCAATAATAAAATCATTGGGGCTAAGATTTACAAAGTAGATGGATTTTTTAGCAAGGATGATCCAAAATCTGTGAGGGATATAGATGGTCATGGCACTCATGTAGCATCAACAGCGGCTGGGAATCCAGTTAGCACAGCTAGCATGTTAGGCCTTGGTCAGGGAACATCAAGAGGTGGCGTGACAAAAGCACGCATTGCTGTGTACAAAGTGTGTTGGTTTGATGGTTGTACTGATGCAGACATACTTGCTGCATTTGATGATGCAATTGCAGATGGGGTTGACATAATAACAGTTTCTCTTGGAGGGTTCAGTGATGAAAACTACTTTAGAGATGGAATAGCCATTGGAGCATTTCATGCTGTGAGAAATGGAGTATTGACAGTAACTTCAGCTGGAAACAGTGGTCCAAGACCTTCCTCCCTGTCCAACTTTTCACCTTGGTCAATTAGTGTGGCTGCTAGTACCATAGACAGGAAGTTTGTTACCAAGGTTGAATTAGGTAACAAAATCACCTATGAGGGTACCTCAATAAATACATTTGATCTCAAGGGAGAATTGTATCCTATAATTTATGGTGGAGATGCACCAAACAAAGGCGAAGGCATAGATGGATCATCATCAAGGTATTGCTCCAGCGGTTCGTTGGACAAAAAATTAGTTAAGGGTAAAATTGTTCTCTGTGAGAGCAGAAGCAAAGCACTAGGCCCTTTCGATGCTGGTGCTGTTGGGGCATTGATACAAGGACAAGGTTTTAGAGATCTTCCTCCCTCTCTTCCATTGCCTGGATCTTACCTTGCCTTGCAGGATGGTGCCTCTGTATATGACTACATAAACTCTACAAGGTATCAACTAAAGATGCCACTTACATTAACCAAGAGTGTAGAGAACCATATATACTTGCCTAATATGGATTCTTTTTCTTTTTCTTTTTCTTACAGGACTCCAATTGCAACCATATTTAAGACTGATGAGACAAAGGATACAATAGCTCCTGTTGTGGCTTCTTTCTCTTCAAGGGGTCCAAACATTGTTACACCTGAAATTCTCAAGCCGGATTTAGTGGCTCCCGGAGTTTCCATTCTAGCTAGTTGGTCTCCAGCTTCCCCTCCTTCTGACATTGAAGGTGACAACAGAACATTGAATTTCAATATTATCTCAGGAACTTCAATGGCTTGTCCACATGTTTCTGGGGCCGCAGCGTATGTTAAATCATTTCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACAACAGCTAAACAACTTAGTCCCAAGACCCATCTTCTGGCAGAATTTGCATACGGCGCAGGCCAAATTGATCCTTCCAAGGCTGTGTACCCTGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAAGATTTTTATGTGGACAAGGGTATAGTACAAGGACTTTACAACTCATCACAGGAGATAACAGTAGCTGCCCTGAAACAAAGAATGGTTCAGCAAGGGATCTAAACTATGCTTCATTTGCACTCTTTGTCCCACCCTCCAACTCCAATAGTGTAAGTGGCAGTTTTAACAGGACTGTTACAAATGTTGGGTCACCAAAGTCAACATATAAAGCTACTGTGACTTCTCCCAAGGGACTGAAAATTGAGGTGAACCCCAGTGTTCTACCATTCACTTCTCTTAACCAAAAGCAAACATTTGTGCTCACAATTACGGGAAAACTAGAAGGACCTATAGTTTCAGGCTCTTTGGTTTGGGATGATGGTAAGTACCAAGTGAGGAGCCCCATTGTTGTGTTCAATACAGCATAA 2313 0.4189 MTMDTCKTSPHLLILLCFASFLQLCHSASQQKSYIIYTGNSMNDEASALTLYSDMLQEVADSNAEPKLVQHHFKRSFSGFVAMLTEEEANRMARHDRVVAVFPNKKKQLHTTRSWDFIGFPLQANRAPAESDVIIAVFDSGIWPESESFNDKGFGPPPSKWKGTCQTSKNFTCNNKIIGAKIYKVDGFFSKDDPKSVRDIDGHGTHVASTAAGNPVSTASMLGLGQGTSRGGVTKARIAVYKVCWFDGCTDADILAAFDDAIADGVDIITVSLGGFSDENYFRDGIAIGAFHAVRNGVLTVTSAGNSGPRPSSLSNFSPWSISVAASTIDRKFVTKVELGNKITYEGTSINTFDLKGELYPIIYGGDAPNKGEGIDGSSSRYCSSGSLDKKLVKGKIVLCESRSKALGPFDAGAVGALIQGQGFRDLPPSLPLPGSYLALQDGASVYDYINSTRYQLKMPLTLTKSVENHIYLPNMDSFSFSFSYRTPIATIFKTDETKDTIAPVVASFSSRGPNIVTPEILKPDLVAPGVSILASWSPASPPSDIEGDNRTLNFNIISGTSMACPHVSGAAAYVKSFHPTWSPAAIRSALMTTAKQLSPKTHLLAEFAYGAGQIDPSKAVYPGLVYDAGEIDYVRFLCGQGYSTRTLQLITGDNSSCPETKNGSARDLNYASFALFVPPSNSNSVSGSFNRTVTNVGSPKSTYKATVTSPKGLKIEVNPSVLPFTSLNQKQTFVLTITGKLEGPIVSGSLVWDDGKYQVRSPIVVFNTA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1328 770 Gene3D - 638 768 - -
Gso13g1328 770 CDD Peptidases_S8_3 107 595 IPR034197 -
Gso13g1328 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 484 767 IPR045051 -
Gso13g1328 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 479 IPR045051 -
Gso13g1328 770 ProSiteProfiles Serine proteases, subtilase domain profile. 114 621 - -
Gso13g1328 770 Pfam Subtilase family 131 613 IPR000209 GO:0006508|GO:0008236
Gso13g1328 770 PANTHER PUTATIVE-RELATED 484 767 - -
Gso13g1328 770 PANTHER PUTATIVE-RELATED 22 479 - -
Gso13g1328 770 SUPERFAMILY Subtilisin-like 109 625 IPR036852 GO:0004252|GO:0006508
Gso13g1328 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 110 IPR037045 -
Gso13g1328 770 CDD PA_subtilisin_like 337 454 - -
Gso13g1328 770 ProSitePatterns Serine proteases, subtilase family, histidine active site. 203 213 IPR022398 -
Gso13g1328 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Gso13g1328 770 Gene3D Peptidase S8/S53 domain 111 363 IPR036852 GO:0004252|GO:0006508
Gso13g1328 770 Gene3D Peptidase S8/S53 domain 477 637 IPR036852 GO:0004252|GO:0006508
Gso13g1328 770 Pfam Peptidase inhibitor I9 33 110 IPR010259 -
Gso13g1328 770 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Gso13g1328 770 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Gso13g1328 770 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Gso13g1328 770 Pfam Fibronectin type-III domain 668 766 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1328 Gso-Chr13 28729485 28734273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1328 31 769 Subtilisin-like Serine Gene Family AT5G59120 46.124 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1328 - - gsj:114382379 1517.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0292 18 2639586 2644287 Gso13g1328 13 28729485 28734273 GST
Gso14g0553 14 5298641 5305312 Gso13g1328 13 28729485 28734273 PCT
Gso2g2146 2 46093411 46099081 Gso13g1328 13 28729485 28734273 PCT