Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1282 ATGGCAATTGGGTTCATGGAGGTGCAGCTTGTGAAAGCAAAGGAGTTGTGTGACACTGATTTCTTTGGTAGTATGGACCCGTATGTTGTGATACAATACAACGGCCAAGAGCAAAGGAGTAGTGTTGCTAAGGGACAGGGCAATAATCCGGTATGGAATGAGAAATTTGTGTTCAAGGTAGAATATCCTACACTGAGTAATTCATACAAGATTATCTTAAAAATCATGGACAAGGATCTTTTATCTGCAGATGACTTTGTTGGTCAAGCCATAGTCTATGTGGAAGATTTATTAGCCATAGGGGTAGAGGATGGTGCGGCTGAGCTACAACCTCTAAAGTACAGAGTAATTCGTGCAGATCAATCTTATTGTGGAGAAATTGATCTTGGTATAACTTTTAAGGTGGAAGAAGAGTTCAATGGAGAAGCTAAACGAGGATCGAAGGACAGTAAATAG 456 0.4035 MAIGFMEVQLVKAKELCDTDFFGSMDPYVVIQYNGQEQRSSVAKGQGNNPVWNEKFVFKVEYPTLSNSYKIILKIMDKDLLSADDFVGQAIVYVEDLLAIGVEDGAAELQPLKYRVIRADQSYCGEIDLGITFKVEEEFNGEAKRGSKDSK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1282 151 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Gso13g1282 151 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 148 - -
Gso13g1282 151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 133 IPR035892 -
Gso13g1282 151 SMART C2_3c 5 106 IPR000008 -
Gso13g1282 151 PANTHER C2 DOMAIN-CONTAINING 1 148 - -
Gso13g1282 151 Pfam C2 domain 6 102 IPR000008 -
Gso13g1282 151 Gene3D C2 domain 2 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1282 Gso-Chr13 28128690 28130836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1282 3 109 C2H2 Transcription Factor Family AT4G21160 32.710 1.24e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1282 - - gmx:100526962 303.138