Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1266 ATGGAGAACTTGTTGGGTCTGCTGAGAATTCATGTTGAAAAAGGTGTCAATCTTGCCATCAGGGATGTGGTGAGCAGTGACCCTTATGTTGTCATCAAAATGGGCAAGCAGAAGCTGAAGACTCGGGTAGTCAATAAGAATCTAAATCCTGAATGGAATGATGACTTGACCTTGTCTATCTCTGACCCTCATGCTCCAATTCATCTACATGTGTATGACAAGGACACATTTAGCATGGATGACAAAATGGGGGATGCAGAGTTTTTCATAGGTCCATTTATTGAAGCAGTGAAGATGCGCTTATCAAGTCTCCCCAACAATACTATAGTTACAAAAGTGCTACCTAGCAGACAAAACAGTTTAGCTGAAGAGAGTCACATTGTGTGGAAGGATGGCAAAGTTGTCCAAAACATGGTTCTTAGACTAAGAAATGTTGAGACTGGGGAAGTGGAGCTCCAGTTGCATTGGATTGACATTCCTGGTTCAAGGCATCTCTAG 498 0.4237 MENLLGLLRIHVEKGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVNKNLNPEWNDDLTLSISDPHAPIHLHVYDKDTFSMDDKMGDAEFFIGPFIEAVKMRLSSLPNNTIVTKVLPSRQNSLAEESHIVWKDGKVVQNMVLRLRNVETGEVELQLHWIDIPGSRHL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1266 165 CDD C2_ArfGAP 5 148 - -
Gso13g1266 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Gso13g1266 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Gso13g1266 165 Gene3D C2 domain 4 161 IPR035892 -
Gso13g1266 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Gso13g1266 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Gso13g1266 165 SMART C2_3c 7 102 IPR000008 -
Gso13g1266 165 Pfam C2 domain 6 89 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1266 Gso-Chr13 27928246 27930652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1266 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 6.83e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1266 - - gmx:100306214 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0350 18 3310190 3312766 Gso13g1266 13 27928246 27930652 GST