Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1259 ATGTCCACTGTGAGAGTTCAAGTTTCGGCGTGTGTGTTTTCTGCCACCGTCAACAACCTTTGCCTCCGCCAAAACGCCGTCGTTTCCTTCAGAAAGAAGAAGCTTCTCAGATTGGTCTCAATGTCTTCCGTTCCTCCTTCCCAACCCTTCGAAATCGCCGTTAAAGCTTCCGTCACCACACCCAACAGGCTCGGCGACTGCCCTTTTTGCCAAAGGGTGTTGCTGACACTGGAGGAAAAACATCTACCTTATGACCCCAAGTTGGTGGATTTGACCAACAAGCCAGAATGGTTCCTTAAAGTCAATCCTGATGGTAAAGTTCCTGTCATAAAGTTTGATGAGAAGTGGGTTCCTGATTCAGATATTATTACTCAAACATTGGAAGAGAAGTATCCCAGCCCCCCATTGTTGACCCCACCTGAAAAGGCCACGGCGGGGTCAAAGATCTTTTCAACATTTATTGGTTTTCTCAAGAGCAAGGATCCCAATGATGGAACAGAACAAGCATTACTTAGTGAACTGAGCTCTTTCAGTGATTACATCAAGGAAAATGGTCCTTTCATCAACGGTAGTGAGATATCTGCAGCTGACCTATCACTTGGACCAAAGCTATACCATTTAGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATGTCATTGAAGGTTGGCGTCCTAAAGTGGAAGGCTAA 780 0.4487 MSTVRVQVSACVFSATVNNLCLRQNAVVSFRKKKLLRLVSMSSVPPSQPFEIAVKASVTTPNRLGDCPFCQRVLLTLEEKHLPYDPKLVDLTNKPEWFLKVNPDGKVPVIKFDEKWVPDSDIITQTLEEKYPSPPLLTPPEKATAGSKIFSTFIGFLKSKDPNDGTEQALLSELSSFSDYIKENGPFINGSEISAADLSLGPKLYHLEIALGHYKKWTVPDSLTSLKSYMKVIFSRESFVKTSAQPQDVIEGWRPKVEG* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1259 259 SFLD Main (cytGST) 66 232 - -
Gso13g1259 259 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 258 IPR044627 GO:0033355|GO:0045174|GO:0098869
Gso13g1259 259 CDD GST_N_family 67 128 - -
Gso13g1259 259 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 1 258 - -
Gso13g1259 259 Pfam Glutathione S-transferase, N-terminal domain 66 135 IPR004045 -
Gso13g1259 259 SUPERFAMILY GST C-terminal domain-like 130 256 IPR036282 -
Gso13g1259 259 SFLD Glutathione Transferase (cytosolic) 66 232 IPR040079 -
Gso13g1259 259 Gene3D Glutaredoxin 49 136 - -
Gso13g1259 259 SUPERFAMILY Thioredoxin-like 66 133 IPR036249 -
Gso13g1259 259 Gene3D - 137 259 - -
Gso13g1259 259 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 57 135 IPR004045 -
Gso13g1259 259 CDD GST_C_DHAR 136 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1259 Gso-Chr13 27838101 27843293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1259 1 259 Glutathione S-transferase Gene Family AT5G16710 65.900 2.28e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1259 K21888 - gmx:100805216 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0354 18 3390618 3395681 Gso13g1259 13 27838101 27843293 GST