Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1236 ATGCCCTTGGAAGGGATTTTCATTGAACCTACTTCAACTTCTATACCAGATCTTTCCCTTCACATAAGTCCACCAAGCACTTCCTCTTCCTCTTCTTTGATTTGCAGCAATAACAACAACAATAACAACACATCCGGTGGTGGTGGTGGCATCAATTATGAGGCACACAATTCAAGAAGCACAAATTTCCCTTCTCAAGCTCACACCGAGCTTTCTTTGGGAAGGAATTTCAGTGTTGGAGGAGGAGGAAGAGGTGGAGGAGCTCTTGAAGAACCACCACCACATAACAACAACATCAACAATAACCCTTATTATCAAACCCAAAAGGCTCATTTGCAACATCTTCATCAACACCATTCTAATGCTTCAAGAGCAACGACAAGTACTACTACAAGCTCCTCCAATCACATGAGTCACATAAACTATGGGGTTTCTTTGCTTGATGTGTCATCAGAAGGAATGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCATTCCCTTTCTTGCCCTTGGAACATTCAAGATCAGACAAGGATCATCATGCCAAAATGTGTTTATATCATCACATGCCTACATATCCCTCTTTGTCCTCTTCTTGTTCTCCTCTATGCCCTTCTTCTTCTTCTTCTTCTCCAGCTGCACCCTACTTCGTCGCGACCGCAGCAACAGCAGGGGGTCTGGATCCCATGTCCTACCTGAGCTGCTCAGGTGGGACCACAAACCCCGCGGCGTATAGGGCTGCAACAGCCACAAGGTTTAATGGATTTTCCGGGGAGGCTTTCAAATCTCATCATCCATTGCACCACCATCACCACTCATCATCATCATCGTCATCACCACAATATGGGGTTGGACCTGGACCCTCTCATCTTGAGGTCTCTTCAGGGTTGATGAGATCAAGATTTTTACCAAAGTTGCCAGCAAAGAGGAGCATGAGAGCACCGAGAATGCGGTGGACAAGCACACTCCACGCTCGATTTGTCCATGCTGTGGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAGTCAGTTCTTGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTGAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCTGCTTCTTCAGGCCTTTCAGATGGATCAGGAGAAGATGACATGTCTCCAATGGGAAGCAGTGGTGGAATGCGTCAATTTTCAGACCAAAGAAGCCTTTCGGATCGACCAGTGCAACAAGATATGGACTACTCTTCAGCCAACAACACACTATGGAGTAACTCTTCAAGCAGTAGAGAACCATGGCAACAAAATAACTCTAACGACATAGATGGTTTCAGACCCCCAATCTTCCAGTCGCAGCAAATATCAGGAGGGCATCAAATTCAGCAGGAGTGTGATTCAACCCAACTCAAGAACAGTTTGTCAGGATCGAATTTAGAGTGCAAGAACCCAAGCTTGGAGTTCACATTAGGGAGACCGGACTGGAATGGCAAAGGGCAAGCCTAA 1521 0.4615 MPLEGIFIEPTSTSIPDLSLHISPPSTSSSSSLICSNNNNNNNTSGGGGGINYEAHNSRSTNFPSQAHTELSLGRNFSVGGGGRGGGALEEPPPHNNNINNNPYYQTQKAHLQHLHQHHSNASRATTSTTTSSSNHMSHINYGVSLLDVSSEGMRPIKGIPVYHNRSFPFLPLEHSRSDKDHHAKMCLYHHMPTYPSLSSSCSPLCPSSSSSSPAAPYFVATAATAGGLDPMSYLSCSGGTTNPAAYRAATATRFNGFSGEAFKSHHPLHHHHHSSSSSSSPQYGVGPGPSHLEVSSGLMRSRFLPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDMSPMGSSGGMRQFSDQRSLSDRPVQQDMDYSSANNTLWSNSSSSREPWQQNNSNDIDGFRPPIFQSQQISGGHQIQQECDSTQLKNSLSGSNLECKNPSLEFTLGRPDWNGKGQA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1236 506 MobiDBLite consensus disorder prediction 114 136 - -
Gso13g1236 506 SUPERFAMILY Homeodomain-like 314 370 IPR009057 -
Gso13g1236 506 MobiDBLite consensus disorder prediction 31 54 - -
Gso13g1236 506 MobiDBLite consensus disorder prediction 481 506 - -
Gso13g1236 506 Gene3D - 316 373 - -
Gso13g1236 506 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 506 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gso13g1236 506 MobiDBLite consensus disorder prediction 372 454 - -
Gso13g1236 506 MobiDBLite consensus disorder prediction 398 454 - -
Gso13g1236 506 MobiDBLite consensus disorder prediction 266 292 - -
Gso13g1236 506 MobiDBLite consensus disorder prediction 119 136 - -
Gso13g1236 506 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 506 - -
Gso13g1236 506 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 317 370 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1236 Gso-Chr13 27468250 27474942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1236 1 503 G2-like Transcription Factor Family AT5G16560 38.654 1.62e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso13g1236 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1236 - - gmx:100813413 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0379 18 3695361 3701695 Gso13g1236 13 27468250 27474942 GST