Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1224 ATGAATATGGCTCCTGTTTCATTGCCTCCTGGGTTTAGGTTCCACCCCACAGACGAAGAACTCGTTTCTTATTACCTGAAAAGAAAGATAAACGGTCGTAAGATTGAGTTAGAGATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGGAAAGATTTGGAGTGGTATTTCTTCAGCCCTAGAGATAGGAAGTACCCTAATGGATCAAGGACCAATCGTGCAACAAAATCTGGGTATTGGAAAGCCACAGGGAAGGACCGTAAGGTGAATTCTCAGAGCCGTGCAATAGGGATGAAGAAAACCCTAGTTTACTATAGAGGTAGGGCACCACATGGTTGCCGCACCGGTTGGGTTATGCATGAGTACCGTCTTGATGAGACTCAGTGCGAAACTAATTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTCAAGAAGACTGCAGTGATTCCCCCAAAAGTTGGAGATCAGCACTATGTTAATGTTCTTAGCCATGCAAATCAGATGACAAGTGATCAATCATCAAGCATTGACATTGAGCTATACTCAGAAGGAAGAGGAGAAGTTTTAGAGAGCTCAAATTATTTGATGCCGTGGGATACATGCCCATCCCCAAACATAAATATTGGGTCTTCTCTCAATATCAATATCAATGGTGGGACGAAAAGGGATAATAATAATAATAATACTGGGACATGGTCACACTTCTTATCATCAGAAGACTTACTCAATCTTCCAACATCTACTTCTTCATTTCCCAATTATGGATCTATGAGTTACCCTCCATCAAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAGCATAGGTTTACCATGCCTCCTTTGGAGGTGCAGCAGGACTTCCCTCAAGTTGGCATTTCCGAGCTGAAGATGGCACAAGCCTCGGCTTCCAATATGTGCGGAGGAAGCAGAAATAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCCCAGGAATTAATAAATCAATCCAACTACTCATCAGCACAGGCATTTGGTGCCAATGAAAACAACTACGCTCCTCCTCATGAAAGTGATTTCACTTTTATGGTTGGCACCAATTACAATCATGTGAATGATATGAACACCATGGGATTTGTTGACAATATAGCATGGGAAGACCCTAACGCAAGATCAATAGAGATCGGGGATCTTGATGATGGATTCAAGACAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCCAGCAAAAATATGGAAAAGGGCTTTATGGAAGAGCAAAAGATTGTGCCAATTGAGCATATCTCAAACTTCCAAGCTAACAGGGAAGAAAATGAGGTGCAAGTAGTATCTGAGCAGCACAATAGCAACAAAGAACTCAATGATACTGACATTGATGATTTCTCAATGGGATTCATCAATACTGACGACCCCAATGAGAACTTCATAGATGAGGGTAACATTGACTATTCAAATTCTACAAACTTTGAGGTTGTTGAGGAAACAAAAGTCAGTCATGGAATGTTTGTCTCCACTCGCCAAGTAGCTGATACATTCTTTCATCAAATAGCTCCTTCACAAACCGTCAAAGTTCAACTCAATCCAGTACTGGCTGAAAATCAATCTATAGAGAATGCAGTAGTAATGGTTAACCAAGGGCACTCTTTCTTTAGAAAGTTTAGGGCTTATGTGATGGGGAAGCTGATCAAGCCATCAAACACAATAGCAAGTGCCCTTGTATTCATCTTTGCACTTTTGTTGGTGCATTGTGTTTGTTTGAAGGAGCAAGTAGGTGAAGATTTGAAACCAGACCCCAAATGCTTTGATGGTGCTAACACCATGAAGAAAATGAGACAATTACCAGCTGAGAATAATATCATATGGAATGAACAAGAAATTTTTTGGTCTGTTGGTATTAAATGTGGGAAAGGATTTGGTGTGGTCTTGAAGAAGATAGGCATTTTCCTCACCATATCATTGGCTCTTTGTACCATGTGGGCTAATCATGTTATAGTTGACTCTTAG 2064 0.4113 MNMAPVSLPPGFRFHPTDEELVSYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNSGLQDAYALCRVFKKTAVIPPKVGDQHYVNVLSHANQMTSDQSSSIDIELYSEGRGEVLESSNYLMPWDTCPSPNINIGSSLNININGGTKRDNNNNNTGTWSHFLSSEDLLNLPTSTSSFPNYGSMSYPPSKVDIALECARMQHRFTMPPLEVQQDFPQVGISELKMAQASASNMCGGSRNNETDILQEILSVAHASQELINQSNYSSAQAFGANENNYAPPHESDFTFMVGTNYNHVNDMNTMGFVDNIAWEDPNARSIEIGDLDDGFKTERMVENLRWVGMSSKNMEKGFMEEQKIVPIEHISNFQANREENEVQVVSEQHNSNKELNDTDIDDFSMGFINTDDPNENFIDEGNIDYSNSTNFEVVEETKVSHGMFVSTRQVADTFFHQIAPSQTVKVQLNPVLAENQSIENAVVMVNQGHSFFRKFRAYVMGKLIKPSNTIASALVFIFALLLVHCVCLKEQVGEDLKPDPKCFDGANTMKKMRQLPAENNIIWNEQEIFWSVGIKCGKGFGVVLKKIGIFLTISLALCTMWANHVIVDS* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1224 687 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Gso13g1224 687 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 3 413 - -
Gso13g1224 687 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Gso13g1224 687 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Gso13g1224 687 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Gso13g1224 687 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1224 Gso-Chr13 27306038 27311239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1224 3 678 NAC Transcription Factor Family AT1G65910 42.714 1.06e-163 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso13g1224 NAM 1.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1224 - - gsj:114381841 1390.17