Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1211 ATGGAAAAGCTTCTGGTCTCCGATGAGGCTCGCAGGGAGTTCTCCAATCTCCATTACGCTTTCCATGAGGTTAACTCCCAACTCCAAACCAAGTTTAGCCAGGTATTTACATGGGGTGTTTGTTTTTTAATTTTTGACAGGGTTCAAGCTTTAATATTGTCACCAATGAGGGAACTAACCTCGCAAATTGAGATGGTTATATTGGTTGTTGGGGATTTCATCAATATACAAGCTCATGCATGCGTTAGAGGTAAAAGTGTGGGAGAAGACATAAGGAAACTTGAGTATGGAGTTCATGTGGTGTTTGGAACTCCTGGCCAATTTGACAGGTACTACTCCATGTATGGGCATGTTGAGAAACTAGCAGAAGAAATAAAGAAAGGGGCTTCCTCTGTGGAAGGTGTTGGGGCCAAGTTATGCAGAGATGTACCTAAGACACTACTCAATGAGGTGTTTGGTAAGATGAGTGCACCACCCAAGAGTAATGTACCAGTCATTACCCCCAATGAACTATCGGAGACTGATGGCTTCATGACAAGGTTTGGAATGATGGCTGCTCATTATAAAGCCTTTCTAGATGCTACTGGAGGCTTAAGGAGAGCACAACAGCTTGCAGGCAAGTCTATTGAACTCTTCTACAACACTAGTTCACAAGGTGAAAGTCCATATGGTGTCGAAACTTATGTCGTTGACGAATCAAGACAACCAAGTGAGCTTGAGTTACAACAAGCATTCCACCAAGGGAAGTACATTGTCGGCATCACAAAGAAGCTCAAGCGAGTTGCATAA 789 0.4322 MEKLLVSDEARREFSNLHYAFHEVNSQLQTKFSQVFTWGVCFLIFDRVQALILSPMRELTSQIEMVILVVGDFINIQAHACVRGKSVGEDIRKLEYGVHVVFGTPGQFDRYYSMYGHVEKLAEEIKKGASSVEGVGAKLCRDVPKTLLNEVFGKMSAPPKSNVPVITPNELSETDGFMTRFGMMAAHYKAFLDATGGLRRAQQLAGKSIELFYNTSSQGESPYGVETYVVDESRQPSELELQQAFHQGKYIVGITKKLKRVA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1211 262 PANTHER FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED 219 262 - -
Gso13g1211 262 PANTHER FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED 89 219 - -
Gso13g1211 262 SUPERFAMILY Flavoproteins 111 259 IPR029039 -
Gso13g1211 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 113 IPR027417 -
Gso13g1211 262 Pfam DEAD/DEAH box helicase 46 112 IPR011545 GO:0003676|GO:0005524
Gso13g1211 262 Gene3D - 110 260 IPR029039 -
Gso13g1211 262 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 89 219 - -
Gso13g1211 262 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 219 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1211 Gso-Chr13 27083780 27086488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1211 48 107 Eukaryotic Initiation Factors Gene Family AT3G19760 70.000 1.79e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1211 K03809 - gsj:114381743 522.316