Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1209 ATGATGGACTCGCACAAGCAACTATTTTTCCTCTCATTTCTTCCCCTACTACTTCTACTTCTCTCAGGGCATATGGGGCTGCAATTAACTGAGGCTCACTTGCAACGCCATGAGATGAATTATCCCCCGAAAATGTTGTTGGTTTTTGGGGACTCGTATGTTGATACCGGGAACACGAGAATAGATCAAGCTGGATCGTGGAAAAACCCTTATGGTGTAACTTTTCCCGGAAAACCAGCCGGTAGATTCTCCGATGGTAGAGTTCTAACCGACTTCATTGCTAAGTATTTGGGAATCAAATCGCCAGTTCCGTACAAATTCAGGAAACTGATGCTGAAACAATTGAAATCTGGGATGAATTTTGCATATGGTGGCACTGGTGTGTTTGACACGTCCTCCAAAAACCCAAACATGACAATCCAAATCGATTTTTTGAAGCAATTGATAAAAGAACATGTGTACACGACCTCAGATCTGAACAACTCAGTGGCCTATGTTTCCGTAGCTGGAAATGATTACAATTTCTACTTGGCCACAAATGGATCTATTGAGGGTTTCCCGTCTTTCATCGCCTCAGTGGTTAACCAAACTGCCACTAACTTGCTTCACATCCAAAGGTTGGGAGTGAGAAAAATTGTTGTGGGTGGTCTACAACCCCTTGGATGTCTTCCTTCCTCCACAGCCTTATCTTCATTCCAACAATGTAATAGCACATTCAACGACCTCATAGGTCTCCACAACAAACTATTGAACCAAGCCGTGACCAAGTTGAACCAAAAAAGCAAGGATAACTCCACCTTCATAGTTCTTGACCTTTTCGACACTTTCATGTCAGTGTTAAACCACCCATCTACCAATAACATTAAGGACCCTCTCAAGCCTTGCTGCGTAGGGTTAAGTAGCCAAGATTTTTGTGGGAGCGTGGACGAGAGAAATGTTAAGCAATATAAGGTTTGTGACAGTCCCAAATCAGCTTTCTTTTGGGATCTCTTGCACCCAACTCAAGCAGGTTGGCATGCTGTGTATAATAAGTTGCAAACGACGACGAGTGCTCTTCGTCGACTTCGATACTAA 1074 0.433 MMDSHKQLFFLSFLPLLLLLLSGHMGLQLTEAHLQRHEMNYPPKMLLVFGDSYVDTGNTRIDQAGSWKNPYGVTFPGKPAGRFSDGRVLTDFIAKYLGIKSPVPYKFRKLMLKQLKSGMNFAYGGTGVFDTSSKNPNMTIQIDFLKQLIKEHVYTTSDLNNSVAYVSVAGNDYNFYLATNGSIEGFPSFIASVVNQTATNLLHIQRLGVRKIVVGGLQPLGCLPSSTALSSFQQCNSTFNDLIGLHNKLLNQAVTKLNQKSKDNSTFIVLDLFDTFMSVLNHPSTNNIKDPLKPCCVGLSSQDFCGSVDERNVKQYKVCDSPKSAFFWDLLHPTQAGWHAVYNKLQTTTSALRRLRY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1209 357 Gene3D SGNH hydrolase 35 353 IPR036514 -
Gso13g1209 357 PANTHER OSJNBB0059K02.9 PROTEIN 1 353 - -
Gso13g1209 357 Pfam GDSL-like Lipase/Acylhydrolase 46 344 IPR001087 GO:0016788
Gso13g1209 357 CDD SGNH_plant_lipase_like 46 345 IPR035669 -
Gso13g1209 357 SUPERFAMILY SGNH hydrolase 42 345 - -
Gso13g1209 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1209 Gso-Chr13 27048593 27052852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1209 38 341 Pollen Coat Proteome AT1G75930 27.607 4.22e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1209 - - gmx:100789208 700.279