Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1190 ATGGTTTTATTTTTTTATTTTGTTTTGTTTTCTTTTTTCCTTTTAATCTCTTTGCAGGAAATCAGCTTTTTCTGCAGCTGCGAAACGTGCCAGACATACCTCACTTCAAGCTGGTCCGAAACCTTCGACAACCTCTGCGACTGGTACGCTCACCTCCTCCGAAACTCGCCGAACAAAACCATCCACATCCACGTTCTTCGGAACACGATCACCGCCAACGCGGAGAACGTGGAGTACATACTCAAGACTAAGTTTGAAAACTTCCCCAAGGGAAAACCCTTCTCTGCGATCCTCGGTGACTTTCTCGGCAAAGGAGTCTTCAACGTCGACGGCGACGCGTGGCGTTTCCAGAAGAAGATGGCGAGCCTACACCTCAACAACAACTCCGTAGTAGCCTCCTTCGCCTTCGAAATCGTCAACGACGAAATCAAGAACAGGCTCACCCCGCTTCTTCTAATGAACCAGAAAAACGGCGTCGTGCTGGACCTGCAAGACGTGTTCCAGAGATTCTCCTTCGACTGCATTTGCAGATTCTCCTTCGGGCTGGACCCAGATTTCTGTCTAGAATCTGGGTCCATGCTCGTGTTTGCGAAAAGCTTCGATCTTGCGTCGAAGCTTTCCGCGGAGAGGGCGACAGCTGTGTCGCCCTACGTCTGGAAGGCGAAGAGGCTGTTGAACCTGGGAAGCGAGAAACGGCTCAAGAAAGCCCTTAGAGTGATTAACGCGCTGGCCAAAGAGGTGATAAAGCAAAGGCGCGAAAAGGGTTTCTCCGAAAACAAAGATTTGTTGTCAAGATTCATGAACACGATCCACGACGATGACACGTATTTACGAGACGTTGTCGTGAGTTTTTTATTGGCGGGTCGTGACACCGTGGCTTCGGCACTCACGAGCTTCTTTTATCTCTTGGGGAAGCACCCTGAAGTTGAATCGTTGATTCGCGATGAAGCAGATCGCGTAATTGGGCATGACAAGGATCTCACAAGCTTCGAAGAGCTTAAGCAATTGCACTATTTGCAAGCTGCGACACACGAAAGCATGAGGCTTTTTCCACCGATTCAGTTTGACTCAAAGTTTTGCTTGGAGGACGATGTGTTACCCGATGGGACAAAAGTGGAGAGTGGAACTAGGGTTACTTACCACCCCTACGCGATGGGGAGGTTGGAGGAGATATGGGGTTGTGATTGTTTGGAGTTTCGGCCACAAAGGTGGCTGAAGGATGGGGTGTTTCAACCCATGAATCCGTTCGAGTACCCGGTTTTTCAAGCGGGGTTGAGGGTGTGTGTAGGGAAGGAAGTGGCTCTGATGGAGATGAAGAGTGTGGCAGTTTCGTTGCTGAGGAAGTTCCACATCGAGTTGCTGGCACCCTTGTCTTTTGGGAACCCTCGCTTCTCTCCGGGGCTCACTGCCACTTTTAGTTTTGGCCTTCCCGTGATGGTTCGTGAAAGAGGAACTACAACAACCACCAAACCATCAAAAGGAGTCTAA 1488 0.4973 MVLFFYFVLFSFFLLISLQEISFFCSCETCQTYLTSSWSETFDNLCDWYAHLLRNSPNKTIHIHVLRNTITANAENVEYILKTKFENFPKGKPFSAILGDFLGKGVFNVDGDAWRFQKKMASLHLNNNSVVASFAFEIVNDEIKNRLTPLLLMNQKNGVVLDLQDVFQRFSFDCICRFSFGLDPDFCLESGSMLVFAKSFDLASKLSAERATAVSPYVWKAKRLLNLGSEKRLKKALRVINALAKEVIKQRREKGFSENKDLLSRFMNTIHDDDTYLRDVVVSFLLAGRDTVASALTSFFYLLGKHPEVESLIRDEADRVIGHDKDLTSFEELKQLHYLQAATHESMRLFPPIQFDSKFCLEDDVLPDGTKVESGTRVTYHPYAMGRLEEIWGCDCLEFRPQRWLKDGVFQPMNPFEYPVFQAGLRVCVGKEVALMEMKSVAVSLLRKFHIELLAPLSFGNPRFSPGLTATFSFGLPVMVRERGTTTTTKPSKGV* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1190 495 PANTHER CYTOCHROME P450 8 477 - -
Gso13g1190 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 8 477 - -
Gso13g1190 495 Pfam Cytochrome P450 70 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 SUPERFAMILY Cytochrome P450 43 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1190 495 Coils Coil 233 253 - -
Gso13g1190 495 Gene3D Cytochrome P450 32 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1190 Gso-Chr13 26786347 26788757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1190 15 483 Cytochrome P450 AT2G27690 58.861 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1190 K20624 - gmx:100784058 961.829