Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1186 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTCGAAGTAAGGGAAGACCTAAATACAGAGAAACATGCAGGTATATGTCAGTCCAATTCTGGATATAGCTTGGATGAGAAAAATCAGAAGCATCCTGTGCAGAAACTGGGATATAAGGGTAATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTACTCTTAAATCTTCATCAAGGGATTTAGGCATTTTACAAGATGGTACAAGCCCTAAGATGAAAAGTGCATTCAAAAAACCAATTACAGTGGGTGCTTCTCGGTCCCCACGGATTGGACCTTCTGAGCCTGTTACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCCATGAAAAGATTATCAAAGTCAACTGCTTCTCCACGAATATCTGAGGTTGGGAAGATACAGACATTGTACAACTCAGTTGTAGTTGAAGGTAGACGATCTGGGCCTTCTAATGCTGAGAGTAAAGGGAGTACAAGTGAAATATCTCTAGTGCCAGAAGAGAGCAACTCACTTTCCTTGGATAATGCTTCCCAGTCTCATCCAACTGTTAAAAGCACTTCACTGAGCCCAAATGTTCAATCTTCCAAAATTGCTGCTGCAATTGCAACTACACAAAATGATACTGGGGCTTCATTGATGCCAAGTGACTTGGCTAGTTCATCAAGTAAAGTTGGGGTTCTATCACAGTCATCAGAGCCTGCTCAAATAGAAAAACAAACATCTGAATCTTCTTCATCTAGTTGTAACACCAATGGAAGTAAATTAGAGTTTCCCGAAAATGCTTCTTCCCCTAAAAAGATAGGAAATAAAGCCTCTGCATCAAACAGTGGGCGGAAAGGTAGGTTACAAACAGTCTCTTCCTCATCTACTTCAGTAAATGGCAATAGAGTGTGCAAACTGTCACGCAATGCCCCTCGTACAGTTAAATCATTTATCAAGAACAAAAAATTTGGAAAGAAAAAAGTAAAGCAGGATTCAGTTTCTGCTTTATTTGATCCTACATCCAATGAAGTAAATAACAAGTCAGTTTCTAGTACAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCTATTGAAAACAACGAAGGTGTTACATCATTGGACTCTCTCAGTCCTGGAGAGGGAATAAACTCTGTTAATGTGCACTCTGGCGCAGCATCAGCTGGCTGTAATAGCAGCAGAGAAGTTACAAAAGTGAAAAAGAACACCGTATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGTGATGAGAGTAATCTCAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGAAAGCCATAAGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAAAATTGTTTGTTTGCTATTAAGGTGATGGACAATGAATTTTTGGCAAGAAGGAAGAAGACGCCTAGGGCTCAAACAGAAAGAGAAATATTGAGGATGCTGGATCATCCTTTTCTTCCAACACTGTATGCTCAGTTTACATCAGATAATTTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAGCAGCTTGGCAGAAGTTTTTCAGAGCCAGCAGCTAGGTTTTATGTTGCCGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTGGTTTACCGTGATTTGAAACCTGAAAACATTCTCGTTCGAGAAGACGGCCACATTATGCTCACAGATTTTGATCTGTCGCTAAGGTGTGATGTTAGCCCAACACTTCTGAAGTCATCTTCTGATGTGGATCCTGCTAAGATTTCTGGTCCTTGTGCACAATCAAGTTGCATTGAGCCATTCTGTATTGAACCAGCCTGTCAAGTTCCGTGCTTCAGCCCAAGAATCCTGCCTCCTGCCGCAAAAGCAAGGAAATTAAAAACTGATCTTGCTGCTCAGCTCAGATCGTTGCCACAGCTTGTGGCTGAGCCCACAGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACTTGGCGCCTGAGATCATCAAAGGAGAGGGACATGGAGCGGCAGTTGACTGGTGGACATTCGGTGTTTTTCTGTATGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGATTCCCTGACACCCCATTTGTTAGTATCCAAGGGAGGGATCTCATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAATCGATTGGGTTCAGAGAAAGGGGCTGCTGAGATAAAACAGCACCCCTTCTTTGAAGGCCTGAATTGGGCATTAATACGTTGCGCTATCCCACCAGAACTGCCAGACTTACGTGAATTTGGAGTTTCAGAGATGACCCTACAGTCCCAGGGCAAGGGTGTTAAGTATGTAGAGTGTAATGCAGCAGGAGAGCTAGTGGAATTTGAGTTGTTTTGA 2601 0.4187 MGSFSGTCEIVEVREDLNTEKHAGICQSNSGYSLDEKNQKHPVQKLGYKGNLDDDINKLFESITLKSSSRDLGILQDGTSPKMKSAFKKPITVGASRSPRIGPSEPVTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVVEGRRSGPSNAESKGSTSEISLVPEESNSLSLDNASQSHPTVKSTSLSPNVQSSKIAAAIATTQNDTGASLMPSDLASSSSKVGVLSQSSEPAQIEKQTSESSSSSCNTNGSKLEFPENASSPKKIGNKASASNSGRKGRLQTVSSSSTSVNGNRVCKLSRNAPRTVKSFIKNKKFGKKKVKQDSVSALFDPTSNEVNNKSVSSTTQLVCERCWCAIENNEGVTSLDSLSPGEGINSVNVHSGAASAGCNSSREVTKVKKNTVLKEQLEFSQSSKSSQGDYSSSTSTSDESNLSGSSCGNRPHMSKDVRWKAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGKNCLFAIKVMDNEFLARRKKTPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDVDPAKISGPCAQSSCIEPFCIEPACQVPCFSPRILPPAAKARKLKTDLAAQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDTPFVSIQGRDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLREFGVSEMTLQSQGKGVKYVECNAAGELVEFELF* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1186 866 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 866 - -
Gso13g1186 866 MobiDBLite consensus disorder prediction 422 454 - -
Gso13g1186 866 Pfam Protein kinase domain 710 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1186 866 Pfam Protein kinase domain 482 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1186 866 CDD STKc_phototropin_like 479 836 - -
Gso13g1186 866 MobiDBLite consensus disorder prediction 235 309 - -
Gso13g1186 866 MobiDBLite consensus disorder prediction 157 204 - -
Gso13g1186 866 SUPERFAMILY Protein kinase-like (PK-like) 455 831 IPR011009 -
Gso13g1186 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Gso13g1186 866 Gene3D Transferase(Phosphotransferase) domain 1 706 831 - -
Gso13g1186 866 ProSiteProfiles Protein kinase domain profile. 481 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1186 866 PANTHER FLIPPASE KINASE 1-RELATED 1 866 - -
Gso13g1186 866 Gene3D Phosphorylase Kinase; domain 1 479 560 - -
Gso13g1186 866 MobiDBLite consensus disorder prediction 422 456 - -
Gso13g1186 866 Gene3D Transferase(Phosphotransferase) domain 1 561 629 - -
Gso13g1186 866 SMART serkin_6 481 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1186 866 MobiDBLite consensus disorder prediction 277 309 - -
Gso13g1186 866 MobiDBLite consensus disorder prediction 235 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1186 Gso-Chr13 26705601 26711841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1186 1 866 AGC Kinase Gene Family AT2G36350 51.509 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso13g1186 Pkinase 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1186 - K08286 gmx:100813470 1627.07